Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm24788-201ENSMUST00000104283 156 ntBASIC7.51□□□□□ -1.21
Trim41Q5NCC3 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC7.51□□□□□ -1.21
Trim41Q5NCC3 Gm12304-201ENSMUST00000120312 385 ntBASIC7.51□□□□□ -1.21
Trim41Q5NCC3 Gm26275-201ENSMUST00000157101 268 ntBASIC7.51□□□□□ -1.21
Trim41Q5NCC3 Gm22320-201ENSMUST00000157149 312 ntBASIC7.51□□□□□ -1.21
Trim41Q5NCC3 Gm26414-201ENSMUST00000157674 269 ntBASIC7.51□□□□□ -1.21
Trim41Q5NCC3 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC7.51□□□□□ -1.21
Trim41Q5NCC3 Gm42647-201ENSMUST00000195939 459 ntBASIC7.51□□□□□ -1.21
Trim41Q5NCC3 Gm44389-201ENSMUST00000203795 182 ntBASIC7.51□□□□□ -1.21
Trim41Q5NCC3 AC122242.1-201ENSMUST00000224650 304 ntBASIC7.51□□□□□ -1.21
Trim41Q5NCC3 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Trim41Q5NCC3 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC7.51□□□□□ -1.21
Trim41Q5NCC3 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Trim41Q5NCC3 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Trim41Q5NCC3 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Trim41Q5NCC3 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim41Q5NCC3 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Gm42946-201ENSMUST00000196108 2570 ntBASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Gm14861-201ENSMUST00000119451 455 ntBASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Gm25393-201ENSMUST00000157336 285 ntBASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Mir1251-201ENSMUST00000175486 84 ntBASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Gm27899-201ENSMUST00000184715 64 ntBASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Gm6240-201ENSMUST00000208014 473 ntBASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Gm43329-201ENSMUST00000200120 3232 ntBASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC7.5□□□□□ -1.21
Trim41Q5NCC3 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Gm38057-201ENSMUST00000195551 3203 ntBASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Gm25272-201ENSMUST00000104293 128 ntBASIC7.49□□□□□ -1.21
Trim41Q5NCC3 n-R5s219-201ENSMUST00000104328 132 ntBASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Gm22958-201ENSMUST00000122512 184 ntBASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Gm23956-201ENSMUST00000157211 119 ntBASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Gm16546-201ENSMUST00000159442 355 ntBASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Mir7k-201ENSMUST00000184115 110 ntBASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Gm27457-201ENSMUST00000184771 156 ntBASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Gm29104-201ENSMUST00000186304 222 ntBASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Gm28057-201ENSMUST00000186603 615 ntBASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Gm36259-201ENSMUST00000197340 392 ntBASIC7.49□□□□□ -1.21
Trim41Q5NCC3 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Gm19244-201ENSMUST00000204340 253 ntBASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Mir133a-2-201ENSMUST00000083526 104 ntBASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Gm24449-201ENSMUST00000083985 106 ntBASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Gm25821-201ENSMUST00000093657 133 ntBASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Gm5596-201ENSMUST00000207988 2421 ntBASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Gm42842-201ENSMUST00000197736 3004 ntBASIC7.49□□□□□ -1.21
Trim41Q5NCC3 Gm38235-201ENSMUST00000194600 4952 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Mir147-201ENSMUST00000102354 79 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm25380-201ENSMUST00000175463 107 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm22775-201ENSMUST00000177630 120 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm24641-201ENSMUST00000178055 107 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm25484-201ENSMUST00000178217 107 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm26138-201ENSMUST00000179236 107 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm22821-201ENSMUST00000179288 107 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm7258-201ENSMUST00000179317 300 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm23569-201ENSMUST00000180120 120 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC7.48□□□□□ -1.21
Trim41Q5NCC3 AC150560.2-201ENSMUST00000227208 171 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm23140-201ENSMUST00000082487 107 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm24152-201ENSMUST00000082764 163 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm23298-201ENSMUST00000083181 107 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm23297-201ENSMUST00000083184 127 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm24614-201ENSMUST00000083269 107 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm22057-201ENSMUST00000083387 107 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm25516-201ENSMUST00000083857 107 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm23947-201ENSMUST00000093636 107 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm5117-201ENSMUST00000178878 2553 ntBASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC7.48□□□□□ -1.21
Trim41Q5NCC3 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Trim41Q5NCC3 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC7.47□□□□□ -1.21
Trim41Q5NCC3 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC7.47□□□□□ -1.21
Trim41Q5NCC3 Gm14069-201ENSMUST00000120815 229 ntBASIC7.47□□□□□ -1.21
Trim41Q5NCC3 Gm11456-201ENSMUST00000121070 256 ntBASIC7.47□□□□□ -1.21
Trim41Q5NCC3 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC7.47□□□□□ -1.21
Trim41Q5NCC3 AC123618.1-201ENSMUST00000220174 360 ntBASIC7.47□□□□□ -1.21
Trim41Q5NCC3 AC154527.5-201ENSMUST00000224448 496 ntBASIC7.47□□□□□ -1.21
Trim41Q5NCC3 Gm22806-201ENSMUST00000082738 136 ntBASIC7.47□□□□□ -1.21
Trim41Q5NCC3 Gm22353-201ENSMUST00000083918 136 ntBASIC7.47□□□□□ -1.21
Trim41Q5NCC3 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Trim41Q5NCC3 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms