Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm22128-201ENSMUST00000180346 94 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm37757-201ENSMUST00000193072 210 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm18341-201ENSMUST00000197538 622 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.33□□□□□ -2.04
Usp28Q5I043 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Usp28Q5I043 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm22810-201ENSMUST00000082741 158 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm25199-201ENSMUST00000083095 104 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Gm23848-201ENSMUST00000083826 106 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Usp28Q5I043 AC134917.1-201ENSMUST00000220517 1449 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.33□□□□□ -2.04
Usp28Q5I043 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Usp28Q5I043 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.32□□□□□ -2.04
Usp28Q5I043 Gm14887-201ENSMUST00000119522 663 ntBASIC2.32□□□□□ -2.04
Usp28Q5I043 Gm15760-201ENSMUST00000119553 283 ntBASIC2.32□□□□□ -2.04
Usp28Q5I043 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC2.32□□□□□ -2.04
Usp28Q5I043 Gm24439-201ENSMUST00000157894 117 ntBASIC2.32□□□□□ -2.04
Usp28Q5I043 Gm22290-201ENSMUST00000177655 107 ntBASIC2.32□□□□□ -2.04
Usp28Q5I043 Gm22583-201ENSMUST00000178031 107 ntBASIC2.32□□□□□ -2.04
Usp28Q5I043 Gm24925-201ENSMUST00000178157 107 ntBASIC2.32□□□□□ -2.04
Usp28Q5I043 Gm24713-201ENSMUST00000178850 107 ntBASIC2.32□□□□□ -2.04
Usp28Q5I043 Gm25448-201ENSMUST00000180065 107 ntBASIC2.32□□□□□ -2.04
Usp28Q5I043 Mir7016-201ENSMUST00000184308 72 ntBASIC2.32□□□□□ -2.04
Usp28Q5I043 Gm37727-201ENSMUST00000191637 819 ntBASIC2.32□□□□□ -2.04
Usp28Q5I043 Trbv18-201ENSMUST00000194256 294 ntBASIC2.32□□□□□ -2.04
Usp28Q5I043 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Usp28Q5I043 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.32□□□□□ -2.04
Usp28Q5I043 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.32□□□□□ -2.04
Usp28Q5I043 AC123656.2-201ENSMUST00000226726 227 ntBASIC2.32□□□□□ -2.04
Usp28Q5I043 AC113031.5-201ENSMUST00000227116 606 ntBASIC2.32□□□□□ -2.04
Usp28Q5I043 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.32□□□□□ -2.04
Usp28Q5I043 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Usp28Q5I043 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Usp28Q5I043 Gm13343-201ENSMUST00000116474 105 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Gm11835-201ENSMUST00000120635 663 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Gm13720-201ENSMUST00000120741 196 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Gm23212-201ENSMUST00000122718 60 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Usp28Q5I043 Gm23078-201ENSMUST00000157848 148 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC2.31□□□□□ -2.04
Usp28Q5I043 Mir3075-201ENSMUST00000175340 85 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Usp28Q5I043 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Gm25361-201ENSMUST00000179358 76 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Usp28Q5I043 Gm27869-201ENSMUST00000184327 122 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Gm29073-201ENSMUST00000185563 664 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.31□□□□□ -2.04
Usp28Q5I043 Gm29165-201ENSMUST00000190655 664 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Gm29211-201ENSMUST00000191470 664 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Trbv22-201ENSMUST00000191697 291 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Gm37743-201ENSMUST00000194645 376 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Gm44324-201ENSMUST00000198517 135 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Gm43587-201ENSMUST00000199590 204 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Usp28Q5I043 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Usp28Q5I043 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Usp28Q5I043 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.31□□□□□ -2.04
Usp28Q5I043 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm26015-201ENSMUST00000104402 125 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm25529-201ENSMUST00000104850 92 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm14918-201ENSMUST00000118153 268 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm12878-201ENSMUST00000118744 332 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm14593-201ENSMUST00000119948 294 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm14765-201ENSMUST00000121954 326 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm25621-201ENSMUST00000157223 114 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm22560-201ENSMUST00000157332 120 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm22098-201ENSMUST00000157930 85 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
Usp28Q5I043 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm24813-201ENSMUST00000175310 84 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm24315-201ENSMUST00000177835 127 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm26622-201ENSMUST00000180520 298 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm27399-201ENSMUST00000184250 78 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm7329-201ENSMUST00000185915 210 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm28299-201ENSMUST00000189908 339 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm29848-201ENSMUST00000203107 295 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm44041-201ENSMUST00000203678 396 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm44961-201ENSMUST00000207450 196 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm45101-201ENSMUST00000208327 232 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm45387-201ENSMUST00000209792 632 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm22974-201ENSMUST00000083301 103 ntBASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm23741-201ENSMUST00000097237 171 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms