Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC1.29□□□□□ -2.2
Ccdc88bQ4QRL3 Gm22862-201ENSMUST00000178593 121 ntBASIC1.29□□□□□ -2.2
Ccdc88bQ4QRL3 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC1.29□□□□□ -2.2
Ccdc88bQ4QRL3 Mir6904-201ENSMUST00000183443 67 ntBASIC1.29□□□□□ -2.2
Ccdc88bQ4QRL3 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Ccdc88bQ4QRL3 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.28□□□□□ -2.2
Ccdc88bQ4QRL3 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Ccdc88bQ4QRL3 Gm14748-201ENSMUST00000119819 411 ntBASIC1.28□□□□□ -2.2
Ccdc88bQ4QRL3 Gm5309-201ENSMUST00000197416 677 ntBASIC1.28□□□□□ -2.2
Ccdc88bQ4QRL3 Mir301-201ENSMUST00000083655 86 ntBASIC1.28□□□□□ -2.2
Ccdc88bQ4QRL3 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Ccdc88bQ4QRL3 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Ccdc88bQ4QRL3 Gm15147-201ENSMUST00000122263 483 ntBASIC1.27□□□□□ -2.21
Ccdc88bQ4QRL3 Gm24476-201ENSMUST00000157437 131 ntBASIC1.27□□□□□ -2.21
Ccdc88bQ4QRL3 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Ccdc88bQ4QRL3 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Ccdc88bQ4QRL3 Gm38329-201ENSMUST00000193473 427 ntBASIC1.27□□□□□ -2.21
Ccdc88bQ4QRL3 Gm44520-201ENSMUST00000205447 802 ntBASIC1.27□□□□□ -2.21
Ccdc88bQ4QRL3 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Ccdc88bQ4QRL3 Gm6109-201ENSMUST00000223297 348 ntBASIC1.27□□□□□ -2.21
Ccdc88bQ4QRL3 Mir1197-201ENSMUST00000117037 120 ntBASIC1.26□□□□□ -2.21
Ccdc88bQ4QRL3 Gm22158-201ENSMUST00000158411 126 ntBASIC1.26□□□□□ -2.21
Ccdc88bQ4QRL3 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC1.26□□□□□ -2.21
Ccdc88bQ4QRL3 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC1.26□□□□□ -2.21
Ccdc88bQ4QRL3 Gm43944-201ENSMUST00000205220 120 ntBASIC1.26□□□□□ -2.21
Ccdc88bQ4QRL3 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.26□□□□□ -2.21
Ccdc88bQ4QRL3 Gm24793-201ENSMUST00000104289 132 ntBASIC1.25□□□□□ -2.21
Ccdc88bQ4QRL3 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.25□□□□□ -2.21
Ccdc88bQ4QRL3 Gm23605-201ENSMUST00000157255 127 ntBASIC1.25□□□□□ -2.21
Ccdc88bQ4QRL3 Gm25838-201ENSMUST00000158920 120 ntBASIC1.25□□□□□ -2.21
Ccdc88bQ4QRL3 Gm29288-201ENSMUST00000191582 901 ntBASIC1.25□□□□□ -2.21
Ccdc88bQ4QRL3 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
Ccdc88bQ4QRL3 CT030030.1-201ENSMUST00000218809 152 ntBASIC1.25□□□□□ -2.21
Ccdc88bQ4QRL3 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Ccdc88bQ4QRL3 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Ccdc88bQ4QRL3 Snora3-201ENSMUST00000083082 132 ntBASIC1.25□□□□□ -2.21
Ccdc88bQ4QRL3 Gm23040-201ENSMUST00000083869 163 ntBASIC1.25□□□□□ -2.21
Ccdc88bQ4QRL3 Gm22689-201ENSMUST00000102452 110 ntBASIC1.24□□□□□ -2.21
Ccdc88bQ4QRL3 Gm23531-201ENSMUST00000104567 68 ntBASIC1.24□□□□□ -2.21
Ccdc88bQ4QRL3 Gm12417-201ENSMUST00000119153 403 ntBASIC1.24□□□□□ -2.21
Ccdc88bQ4QRL3 Gm13602-201ENSMUST00000122405 493 ntBASIC1.24□□□□□ -2.21
Ccdc88bQ4QRL3 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.24□□□□□ -2.21
Ccdc88bQ4QRL3 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.24□□□□□ -2.21
Ccdc88bQ4QRL3 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Ccdc88bQ4QRL3 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Ccdc88bQ4QRL3 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.24□□□□□ -2.21
Ccdc88bQ4QRL3 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.24□□□□□ -2.21
Ccdc88bQ4QRL3 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC1.24□□□□□ -2.21
Ccdc88bQ4QRL3 Gm5958-201ENSMUST00000147698 297 ntBASIC1.24□□□□□ -2.21
Ccdc88bQ4QRL3 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC1.24□□□□□ -2.21
Ccdc88bQ4QRL3 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC1.24□□□□□ -2.21
Ccdc88bQ4QRL3 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Ccdc88bQ4QRL3 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Ccdc88bQ4QRL3 Gm14678-201ENSMUST00000121396 482 ntBASIC1.23□□□□□ -2.21
Ccdc88bQ4QRL3 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.23□□□□□ -2.21
Ccdc88bQ4QRL3 Gm27711-201ENSMUST00000183802 118 ntBASIC1.23□□□□□ -2.21
Ccdc88bQ4QRL3 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Ccdc88bQ4QRL3 Gm43894-201ENSMUST00000203274 688 ntBASIC1.23□□□□□ -2.21
Ccdc88bQ4QRL3 Gm6590-201ENSMUST00000203343 687 ntBASIC1.23□□□□□ -2.21
Ccdc88bQ4QRL3 Gm24208-201ENSMUST00000082783 135 ntBASIC1.23□□□□□ -2.21
Ccdc88bQ4QRL3 Snord118-201ENSMUST00000082965 135 ntBASIC1.23□□□□□ -2.21
Ccdc88bQ4QRL3 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Ccdc88bQ4QRL3 Gm15110-201ENSMUST00000117545 881 ntBASIC1.22□□□□□ -2.21
Ccdc88bQ4QRL3 Gm15113-201ENSMUST00000119280 836 ntBASIC1.22□□□□□ -2.21
Ccdc88bQ4QRL3 Gm15112-201ENSMUST00000120152 860 ntBASIC1.22□□□□□ -2.21
Ccdc88bQ4QRL3 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC1.22□□□□□ -2.21
Ccdc88bQ4QRL3 Gm25885-201ENSMUST00000157779 109 ntBASIC1.22□□□□□ -2.21
Ccdc88bQ4QRL3 Gm17038-201ENSMUST00000166586 494 ntBASIC1.22□□□□□ -2.21
Ccdc88bQ4QRL3 Gm3027-201ENSMUST00000167579 451 ntBASIC1.22□□□□□ -2.21
Ccdc88bQ4QRL3 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Ccdc88bQ4QRL3 Olfr197-201ENSMUST00000080031 926 ntBASIC1.22□□□□□ -2.21
Ccdc88bQ4QRL3 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Ccdc88bQ4QRL3 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.21□□□□□ -2.22
Ccdc88bQ4QRL3 Gm20630-201ENSMUST00000177387 551 ntBASIC1.21□□□□□ -2.22
Ccdc88bQ4QRL3 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Ccdc88bQ4QRL3 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Ccdc88bQ4QRL3 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Ccdc88bQ4QRL3 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Ccdc88bQ4QRL3 Gm27980-201ENSMUST00000184094 169 ntBASIC1.2□□□□□ -2.22
Ccdc88bQ4QRL3 Gm44182-201ENSMUST00000204052 115 ntBASIC1.2□□□□□ -2.22
Ccdc88bQ4QRL3 Gm19599-201ENSMUST00000218898 358 ntBASIC1.2□□□□□ -2.22
Ccdc88bQ4QRL3 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.19□□□□□ -2.22
Ccdc88bQ4QRL3 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC1.19□□□□□ -2.22
Ccdc88bQ4QRL3 Gm18296-201ENSMUST00000192475 783 ntBASIC1.19□□□□□ -2.22
Ccdc88bQ4QRL3 Gm43250-201ENSMUST00000196536 273 ntBASIC1.19□□□□□ -2.22
Ccdc88bQ4QRL3 Gm42623-201ENSMUST00000197225 379 ntBASIC1.19□□□□□ -2.22
Ccdc88bQ4QRL3 Gm43974-201ENSMUST00000205080 684 ntBASIC1.19□□□□□ -2.22
Ccdc88bQ4QRL3 Gm45590-201ENSMUST00000209715 262 ntBASIC1.19□□□□□ -2.22
Ccdc88bQ4QRL3 Mir196a-2-201ENSMUST00000083554 85 ntBASIC1.19□□□□□ -2.22
Ccdc88bQ4QRL3 Gm22559-201ENSMUST00000157329 134 ntBASIC1.18□□□□□ -2.22
Ccdc88bQ4QRL3 Gm27974-201ENSMUST00000183415 105 ntBASIC1.18□□□□□ -2.22
Ccdc88bQ4QRL3 Gm28453-203ENSMUST00000187041 189 ntBASIC1.18□□□□□ -2.22
Ccdc88bQ4QRL3 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.18□□□□□ -2.22
Ccdc88bQ4QRL3 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.18□□□□□ -2.22
Ccdc88bQ4QRL3 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC1.18□□□□□ -2.22
Ccdc88bQ4QRL3 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.18□□□□□ -2.22
Ccdc88bQ4QRL3 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC1.18□□□□□ -2.22
Ccdc88bQ4QRL3 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Ccdc88bQ4QRL3 Gm19540-201ENSMUST00000221843 810 ntBASIC1.18□□□□□ -2.22
Ccdc88bQ4QRL3 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms