Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm22563-201ENSMUST00000157333 269 ntBASIC2.06□□□□□ -2.08
Shank3Q4ACU6 Gm23473-201ENSMUST00000158883 116 ntBASIC2.06□□□□□ -2.08
Shank3Q4ACU6 Gm3221-201ENSMUST00000164869 440 ntBASIC2.06□□□□□ -2.08
Shank3Q4ACU6 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Shank3Q4ACU6 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Shank3Q4ACU6 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.06□□□□□ -2.08
Shank3Q4ACU6 Mir3098-201ENSMUST00000175416 87 ntBASIC2.06□□□□□ -2.08
Shank3Q4ACU6 Gm38280-201ENSMUST00000192610 158 ntBASIC2.06□□□□□ -2.08
Shank3Q4ACU6 Gm37709-201ENSMUST00000195074 600 ntBASIC2.06□□□□□ -2.08
Shank3Q4ACU6 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.06□□□□□ -2.08
Shank3Q4ACU6 Gm45614-201ENSMUST00000209994 721 ntBASIC2.06□□□□□ -2.08
Shank3Q4ACU6 Gm18488-201ENSMUST00000215082 364 ntBASIC2.06□□□□□ -2.08
Shank3Q4ACU6 CT030184.1-201ENSMUST00000222393 416 ntBASIC2.06□□□□□ -2.08
Shank3Q4ACU6 Gm25126-201ENSMUST00000083343 102 ntBASIC2.06□□□□□ -2.08
Shank3Q4ACU6 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Shank3Q4ACU6 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm12697-201ENSMUST00000118008 667 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm22561-201ENSMUST00000157331 84 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm6395-201ENSMUST00000167639 691 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm25958-201ENSMUST00000175114 71 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm26960-201ENSMUST00000182263 412 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm28917-201ENSMUST00000187294 237 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm28766-201ENSMUST00000191086 234 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm44718-201ENSMUST00000206886 359 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm45023-201ENSMUST00000207951 379 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.05□□□□□ -2.08
Shank3Q4ACU6 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm15312-201ENSMUST00000118827 271 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm13913-201ENSMUST00000121126 260 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm11438-201ENSMUST00000121582 189 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm15309-201ENSMUST00000121644 240 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm23111-201ENSMUST00000122652 105 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm23777-201ENSMUST00000158994 259 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm23415-201ENSMUST00000175519 83 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Mir5136-201ENSMUST00000175573 76 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm25198-201ENSMUST00000178574 110 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm18956-201ENSMUST00000192857 480 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm37213-201ENSMUST00000193077 586 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm44395-201ENSMUST00000197056 153 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm15235-201ENSMUST00000200572 194 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm19244-201ENSMUST00000204340 253 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Gm18892-201ENSMUST00000217628 881 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Mir196b-201ENSMUST00000083509 85 ntBASIC2.05□□□□□ -2.08
Shank3Q4ACU6 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Shank3Q4ACU6 Mir466n-201ENSMUST00000104798 94 ntBASIC2.04□□□□□ -2.08
Shank3Q4ACU6 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Shank3Q4ACU6 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Shank3Q4ACU6 Gm13454-201ENSMUST00000118166 483 ntBASIC2.04□□□□□ -2.08
Shank3Q4ACU6 Gm14566-201ENSMUST00000118915 321 ntBASIC2.04□□□□□ -2.08
Shank3Q4ACU6 Gm6829-201ENSMUST00000119858 360 ntBASIC2.04□□□□□ -2.08
Shank3Q4ACU6 Gm13409-201ENSMUST00000122072 546 ntBASIC2.04□□□□□ -2.08
Shank3Q4ACU6 Gm4916-201ENSMUST00000126139 642 ntBASIC2.04□□□□□ -2.08
Shank3Q4ACU6 Gm22794-201ENSMUST00000157228 306 ntBASIC2.04□□□□□ -2.08
Shank3Q4ACU6 Gm26099-201ENSMUST00000157248 109 ntBASIC2.04□□□□□ -2.08
Shank3Q4ACU6 Gm26029-201ENSMUST00000158659 132 ntBASIC2.04□□□□□ -2.08
Shank3Q4ACU6 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Shank3Q4ACU6 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.04□□□□□ -2.08
Shank3Q4ACU6 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.04□□□□□ -2.08
Shank3Q4ACU6 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.04□□□□□ -2.08
Shank3Q4ACU6 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.04□□□□□ -2.08
Shank3Q4ACU6 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Shank3Q4ACU6 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Shank3Q4ACU6 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Shank3Q4ACU6 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Shank3Q4ACU6 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Shank3Q4ACU6 Gm22494-201ENSMUST00000104495 128 ntBASIC2.03□□□□□ -2.08
Shank3Q4ACU6 Gm2966-201ENSMUST00000166052 481 ntBASIC2.03□□□□□ -2.08
Shank3Q4ACU6 Gm20415-201ENSMUST00000172877 423 ntBASIC2.03□□□□□ -2.08
Shank3Q4ACU6 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.03□□□□□ -2.08
Shank3Q4ACU6 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.03□□□□□ -2.08
Shank3Q4ACU6 Gm43115-201ENSMUST00000196244 160 ntBASIC2.03□□□□□ -2.08
Shank3Q4ACU6 Gm44720-201ENSMUST00000206076 260 ntBASIC2.03□□□□□ -2.08
Shank3Q4ACU6 Gm44555-201ENSMUST00000209008 148 ntBASIC2.03□□□□□ -2.08
Shank3Q4ACU6 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC2.03□□□□□ -2.08
Shank3Q4ACU6 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.03□□□□□ -2.08
Shank3Q4ACU6 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.03□□□□□ -2.08
Shank3Q4ACU6 Gm2446-201ENSMUST00000220144 772 ntBASIC2.03□□□□□ -2.08
Shank3Q4ACU6 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.03□□□□□ -2.08
Shank3Q4ACU6 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC2.03□□□□□ -2.08
Shank3Q4ACU6 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Shank3Q4ACU6 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Shank3Q4ACU6 Gm25131-201ENSMUST00000082653 151 ntBASIC2.03□□□□□ -2.08
Shank3Q4ACU6 Gm23932-201ENSMUST00000082914 107 ntBASIC2.03□□□□□ -2.08
Shank3Q4ACU6 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.03□□□□□ -2.08
Shank3Q4ACU6 Gm23691-201ENSMUST00000101878 107 ntBASIC2.03□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 132.2 ms