Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC2.53□□□□□ -2
Trim40Q3UWA4 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.53□□□□□ -2
Trim40Q3UWA4 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2.53□□□□□ -2
Trim40Q3UWA4 Gm44594-201ENSMUST00000208982 407 ntBASIC2.53□□□□□ -2
Trim40Q3UWA4 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.53□□□□□ -2
Trim40Q3UWA4 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.53□□□□□ -2
Trim40Q3UWA4 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.53□□□□□ -2
Trim40Q3UWA4 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trim40Q3UWA4 Mir137-201ENSMUST00000083635 73 ntBASIC2.53□□□□□ -2
Trim40Q3UWA4 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.53□□□□□ -2
Trim40Q3UWA4 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.53□□□□□ -2
Trim40Q3UWA4 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Gm22939-201ENSMUST00000103958 131 ntBASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Snora36b-201ENSMUST00000104383 132 ntBASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Gm22038-201ENSMUST00000157277 242 ntBASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Gm23332-201ENSMUST00000157424 275 ntBASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Gm17065-201ENSMUST00000165245 239 ntBASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Gm26335-201ENSMUST00000178449 107 ntBASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Gm8532-201ENSMUST00000179174 461 ntBASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Mir7028-201ENSMUST00000185016 64 ntBASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Gm29429-201ENSMUST00000187071 121 ntBASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Gm43355-201ENSMUST00000196541 346 ntBASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Gm43600-201ENSMUST00000202134 223 ntBASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Gm45240-201ENSMUST00000211437 674 ntBASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.52□□□□□ -2.01
Trim40Q3UWA4 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.52□□□□□ -2.01
Trim40Q3UWA4 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm22486-201ENSMUST00000116815 137 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm23867-201ENSMUST00000122649 274 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm25243-201ENSMUST00000174912 207 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm24418-201ENSMUST00000177597 79 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm24639-201ENSMUST00000178518 79 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm23076-201ENSMUST00000179082 79 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm25077-201ENSMUST00000179157 79 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm9022-202ENSMUST00000183285 483 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Mir6353-201ENSMUST00000183596 113 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm28314-201ENSMUST00000191276 345 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm42647-201ENSMUST00000195939 459 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm43901-201ENSMUST00000203247 453 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm19252-201ENSMUST00000204705 305 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm44754-201ENSMUST00000208155 400 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm19140-201ENSMUST00000209790 421 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm45252-201ENSMUST00000211579 397 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm7948-201ENSMUST00000212607 844 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 AC069561.2-201ENSMUST00000217596 420 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 AC131720.2-201ENSMUST00000220420 431 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Gm22247-201ENSMUST00000082476 131 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trim40Q3UWA4 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.51□□□□□ -2.01
Trim40Q3UWA4 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Gm24126-201ENSMUST00000104111 106 ntBASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Gm24376-201ENSMUST00000104399 127 ntBASIC2.5□□□□□ -2.01
Trim40Q3UWA4 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Gm14364-201ENSMUST00000129209 267 ntBASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.5□□□□□ -2.01
Trim40Q3UWA4 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Gm27786-201ENSMUST00000184337 70 ntBASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Gm7871-201ENSMUST00000195346 618 ntBASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Gm18346-201ENSMUST00000216782 325 ntBASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Gm19326-201ENSMUST00000219818 326 ntBASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Gm18696-201ENSMUST00000220103 274 ntBASIC2.5□□□□□ -2.01
Trim40Q3UWA4 AC167192.2-201ENSMUST00000224794 198 ntBASIC2.5□□□□□ -2.01
Trim40Q3UWA4 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Mir208a-201ENSMUST00000083498 83 ntBASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Gm25257-201ENSMUST00000083907 110 ntBASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Mir452-201ENSMUST00000093629 85 ntBASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Trim40Q3UWA4 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.49□□□□□ -2.01
Trim40Q3UWA4 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim40Q3UWA4 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 128.5 ms