Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.3□□□□□ -2.04
Upf3aQ3ULJ3 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Gm22270-201ENSMUST00000104034 132 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Gm22591-201ENSMUST00000104243 106 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Gm13406-201ENSMUST00000121991 256 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Gm25621-201ENSMUST00000157223 114 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Gm23670-201ENSMUST00000157469 119 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Gm24237-201ENSMUST00000157790 132 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Gm24858-201ENSMUST00000158058 323 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Gm24546-201ENSMUST00000158652 102 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Gm21726-201ENSMUST00000179654 392 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Gm28283-201ENSMUST00000185509 178 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Gm20915-201ENSMUST00000191575 663 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Mir7232-201ENSMUST00000197929 74 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Gm44391-201ENSMUST00000198490 93 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Gm43626-201ENSMUST00000198575 162 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 AC132918.1-201ENSMUST00000227877 925 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Gm26206-201ENSMUST00000082908 110 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Gm26055-201ENSMUST00000083038 107 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Gm24490-201ENSMUST00000083803 98 ntBASIC2.29□□□□□ -2.04
Upf3aQ3ULJ3 Gm24098-201ENSMUST00000102075 109 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm25381-201ENSMUST00000102078 109 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm25637-201ENSMUST00000157529 107 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Mir1927-201ENSMUST00000158579 109 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm23025-201ENSMUST00000158769 111 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm21758-201ENSMUST00000179336 819 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm24137-201ENSMUST00000180055 79 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm22391-201ENSMUST00000180356 79 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm29647-201ENSMUST00000188795 666 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm20832-201ENSMUST00000189076 665 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm28241-201ENSMUST00000190916 235 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm28504-201ENSMUST00000190977 666 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm36966-201ENSMUST00000192217 413 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm31511-201ENSMUST00000193134 657 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm38333-201ENSMUST00000193608 604 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm35843-201ENSMUST00000193716 666 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm30638-201ENSMUST00000195570 656 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm36728-201ENSMUST00000195782 665 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm45772-201ENSMUST00000212961 240 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gm3442-201ENSMUST00000216808 710 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Mir423-201ENSMUST00000083584 109 ntBASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
Upf3aQ3ULJ3 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
Upf3aQ3ULJ3 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.05
Upf3aQ3ULJ3 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Mir758-201ENSMUST00000103260 81 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm22151-201ENSMUST00000116963 58 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm14657-201ENSMUST00000117461 302 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm12513-201ENSMUST00000118617 352 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm15029-201ENSMUST00000119742 199 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm12006-201ENSMUST00000120786 403 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm15223-201ENSMUST00000120989 826 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm11384-201ENSMUST00000121376 303 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm22985-201ENSMUST00000122754 116 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm25294-201ENSMUST00000122791 104 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Trav20-201ENSMUST00000142754 347 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm6182-201ENSMUST00000156439 1208 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm26275-201ENSMUST00000157101 268 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm25283-201ENSMUST00000157272 77 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm22093-201ENSMUST00000158980 111 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm17538-201ENSMUST00000168236 327 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm4076-201ENSMUST00000179230 965 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm28163-201ENSMUST00000187099 325 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm37568-201ENSMUST00000191755 364 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm17771-201ENSMUST00000194477 1147 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm38154-201ENSMUST00000195444 340 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm44295-201ENSMUST00000203805 437 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm44990-201ENSMUST00000203922 217 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm23503-201ENSMUST00000083903 107 ntBASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms