Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Trafd1Q3UDK1 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Gm15760-201ENSMUST00000119553 283 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Gm5937-201ENSMUST00000119715 643 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Gm13368-201ENSMUST00000122443 430 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Gm22452-201ENSMUST00000122804 104 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Gm22755-201ENSMUST00000157143 100 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Gm26099-201ENSMUST00000157248 109 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Gm25707-201ENSMUST00000175120 96 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Gm21673-201ENSMUST00000186640 436 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Gm21135-201ENSMUST00000189023 436 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Gm29192-201ENSMUST00000190942 377 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Gm9236-201ENSMUST00000196892 587 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Gm44472-201ENSMUST00000204922 943 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Gm18774-201ENSMUST00000218269 601 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Gm35558-203ENSMUST00000222264 204 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Gm22974-201ENSMUST00000083301 103 ntBASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
Trafd1Q3UDK1 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Gm22957-201ENSMUST00000122511 123 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Gm4468-201ENSMUST00000170206 294 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Gm21827-201ENSMUST00000178247 423 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Gm22851-201ENSMUST00000178741 94 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Gm25074-201ENSMUST00000178782 94 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Mir6386-201ENSMUST00000183558 104 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Gm9696-202ENSMUST00000191541 830 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Gm19694-201ENSMUST00000192364 505 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Gm42622-201ENSMUST00000197229 355 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Gm18982-201ENSMUST00000198118 529 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Gm43264-201ENSMUST00000202284 325 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Gm45101-201ENSMUST00000208327 232 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Gm19032-201ENSMUST00000208584 592 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Gm25856-201ENSMUST00000082786 75 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Gm25628-201ENSMUST00000084002 105 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Gm23741-201ENSMUST00000097237 171 ntBASIC2.45□□□□□ -2.02
Trafd1Q3UDK1 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm26504-201ENSMUST00000102033 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm26147-201ENSMUST00000104479 114 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm12053-201ENSMUST00000119022 252 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm13862-201ENSMUST00000121220 197 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm15077-201ENSMUST00000122344 362 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm25107-201ENSMUST00000122472 129 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm22199-201ENSMUST00000122660 126 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm25621-201ENSMUST00000157223 114 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm24901-201ENSMUST00000158125 110 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm8207-201ENSMUST00000171204 502 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Mir5118-201ENSMUST00000175551 67 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm26502-201ENSMUST00000177732 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm25350-201ENSMUST00000177849 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm23446-201ENSMUST00000177977 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm26201-201ENSMUST00000178047 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm24711-201ENSMUST00000178062 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm24609-201ENSMUST00000178166 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm23265-201ENSMUST00000178321 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm22812-201ENSMUST00000178329 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm26246-201ENSMUST00000178388 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm25155-201ENSMUST00000178450 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm24760-201ENSMUST00000178530 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm22285-201ENSMUST00000178576 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm22417-201ENSMUST00000178656 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm26270-201ENSMUST00000178690 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm23313-201ENSMUST00000178931 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm23089-201ENSMUST00000178947 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 118.7 ms