Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Gm23575-201ENSMUST00000178406 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm24872-201ENSMUST00000178434 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm25646-201ENSMUST00000178527 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm22449-201ENSMUST00000178924 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm24702-201ENSMUST00000178965 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm24206-201ENSMUST00000179011 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm24528-201ENSMUST00000179164 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm22909-201ENSMUST00000179190 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm26334-201ENSMUST00000179403 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm25463-201ENSMUST00000179405 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm25742-201ENSMUST00000179530 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm25209-201ENSMUST00000179576 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm26392-201ENSMUST00000179661 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm25230-201ENSMUST00000179740 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm26434-201ENSMUST00000179778 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm25741-201ENSMUST00000179825 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm24759-201ENSMUST00000179827 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm24219-201ENSMUST00000179861 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm27409-201ENSMUST00000184727 80 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Rnf40Q3U319 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm24166-201ENSMUST00000082724 135 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm23254-201ENSMUST00000097244 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Rnf40Q3U319 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm42436-201ENSMUST00000198804 3656 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf40Q3U319 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Rnf40Q3U319 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Rnf40Q3U319 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC4.91□□□□□ -1.62
Rnf40Q3U319 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.91□□□□□ -1.62
Rnf40Q3U319 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Rnf40Q3U319 Gm22779-201ENSMUST00000104085 107 ntBASIC4.91□□□□□ -1.62
Rnf40Q3U319 Gm13132-201ENSMUST00000121194 472 ntBASIC4.91□□□□□ -1.62
Rnf40Q3U319 n-R5s32-201ENSMUST00000122495 103 ntBASIC4.91□□□□□ -1.62
Rnf40Q3U319 Gm25045-201ENSMUST00000122670 99 ntBASIC4.91□□□□□ -1.62
Rnf40Q3U319 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf40Q3U319 Gm4617-201ENSMUST00000178993 331 ntBASIC4.91□□□□□ -1.62
Rnf40Q3U319 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf40Q3U319 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC4.91□□□□□ -1.62
Rnf40Q3U319 Mir7657-201ENSMUST00000196051 57 ntBASIC4.91□□□□□ -1.62
Rnf40Q3U319 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.91□□□□□ -1.62
Rnf40Q3U319 AC122418.1-201ENSMUST00000225012 511 ntBASIC4.91□□□□□ -1.62
Rnf40Q3U319 n-R5s215-201ENSMUST00000082480 104 ntBASIC4.91□□□□□ -1.62
Rnf40Q3U319 Gm24929-201ENSMUST00000083403 139 ntBASIC4.91□□□□□ -1.62
Rnf40Q3U319 Mir218-2-201ENSMUST00000083649 110 ntBASIC4.91□□□□□ -1.62
Rnf40Q3U319 Gm24163-201ENSMUST00000093660 132 ntBASIC4.91□□□□□ -1.62
Rnf40Q3U319 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.91□□□□□ -1.62
Rnf40Q3U319 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.91□□□□□ -1.62
Rnf40Q3U319 AC153801.2-201ENSMUST00000219875 3372 ntBASIC4.91□□□□□ -1.62
Rnf40Q3U319 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Rnf40Q3U319 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf40Q3U319 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf40Q3U319 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
Rnf40Q3U319 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf40Q3U319 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf40Q3U319 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.91□□□□□ -1.62
Rnf40Q3U319 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Rnf40Q3U319 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.9□□□□□ -1.62
Rnf40Q3U319 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Rnf40Q3U319 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Rnf40Q3U319 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.9□□□□□ -1.62
Rnf40Q3U319 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Rnf40Q3U319 Gm26078-201ENSMUST00000104067 128 ntBASIC4.9□□□□□ -1.63
Rnf40Q3U319 Gm26051-201ENSMUST00000104642 93 ntBASIC4.9□□□□□ -1.63
Rnf40Q3U319 Gm15745-201ENSMUST00000119807 115 ntBASIC4.9□□□□□ -1.63
Rnf40Q3U319 Gm11825-201ENSMUST00000120710 736 ntBASIC4.9□□□□□ -1.63
Rnf40Q3U319 Gm22968-201ENSMUST00000157955 118 ntBASIC4.9□□□□□ -1.63
Rnf40Q3U319 Gm22726-201ENSMUST00000158089 179 ntBASIC4.9□□□□□ -1.63
Rnf40Q3U319 Scarna6-201ENSMUST00000158656 265 ntBASIC4.9□□□□□ -1.63
Rnf40Q3U319 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Rnf40Q3U319 Gm37545-201ENSMUST00000186512 148 ntBASIC4.9□□□□□ -1.63
Rnf40Q3U319 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.9□□□□□ -1.63
Rnf40Q3U319 Gm44376-201ENSMUST00000197570 128 ntBASIC4.9□□□□□ -1.63
Rnf40Q3U319 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.9□□□□□ -1.63
Rnf40Q3U319 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.9□□□□□ -1.63
Rnf40Q3U319 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.9□□□□□ -1.63
Rnf40Q3U319 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.9□□□□□ -1.63
Rnf40Q3U319 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Rnf40Q3U319 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.9□□□□□ -1.63
Rnf40Q3U319 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Rnf40Q3U319 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Rnf40Q3U319 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Rnf40Q3U319 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Rnf40Q3U319 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.89□□□□□ -1.63
Rnf40Q3U319 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Rnf40Q3U319 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.89□□□□□ -1.63
Rnf40Q3U319 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Rnf40Q3U319 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Rnf40Q3U319 Mir294-201ENSMUST00000104710 84 ntBASIC4.89□□□□□ -1.63
Rnf40Q3U319 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.89□□□□□ -1.63
Rnf40Q3U319 Gm11737-201ENSMUST00000118713 468 ntBASIC4.89□□□□□ -1.63
Rnf40Q3U319 Gm22107-201ENSMUST00000122548 100 ntBASIC4.89□□□□□ -1.63
Rnf40Q3U319 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC4.89□□□□□ -1.63
Rnf40Q3U319 Gm23496-201ENSMUST00000157741 248 ntBASIC4.89□□□□□ -1.63
Rnf40Q3U319 Gm17067-202ENSMUST00000180131 123 ntBASIC4.89□□□□□ -1.63
Rnf40Q3U319 Gm27952-201ENSMUST00000184748 105 ntBASIC4.89□□□□□ -1.63
Rnf40Q3U319 Gm37235-201ENSMUST00000195171 59 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms