Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm27640-201ENSMUST00000184580 147 ntBASIC4.09□□□□□ -1.75
Ddb1Q3U1J4 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC4.09□□□□□ -1.75
Ddb1Q3U1J4 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ddb1Q3U1J4 Gm28920-201ENSMUST00000189957 699 ntBASIC4.09□□□□□ -1.75
Ddb1Q3U1J4 Gm44887-201ENSMUST00000208980 178 ntBASIC4.09□□□□□ -1.75
Ddb1Q3U1J4 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.09□□□□□ -1.75
Ddb1Q3U1J4 AC133517.1-203ENSMUST00000225570 390 ntBASIC4.09□□□□□ -1.75
Ddb1Q3U1J4 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC4.09□□□□□ -1.75
Ddb1Q3U1J4 Mir21a-201ENSMUST00000083521 92 ntBASIC4.09□□□□□ -1.75
Ddb1Q3U1J4 Gm8074-201ENSMUST00000095071 252 ntBASIC4.09□□□□□ -1.75
Ddb1Q3U1J4 Gm10343-201ENSMUST00000096279 348 ntBASIC4.09□□□□□ -1.75
Ddb1Q3U1J4 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC4.09□□□□□ -1.75
Ddb1Q3U1J4 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ddb1Q3U1J4 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Ddb1Q3U1J4 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Ddb1Q3U1J4 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Gm23422-201ENSMUST00000102000 107 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Mir344c-201ENSMUST00000103919 92 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Gm13228-201ENSMUST00000118937 634 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Gm15760-201ENSMUST00000119553 283 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Gm15106-201ENSMUST00000119691 821 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Gm11384-201ENSMUST00000121376 303 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Gm23234-201ENSMUST00000157304 134 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Gm24409-201ENSMUST00000157881 152 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Gm24681-201ENSMUST00000158760 107 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Gm18360-201ENSMUST00000173327 1524 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Gm23660-201ENSMUST00000178362 79 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Gm24088-201ENSMUST00000179100 79 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Nras-ps2-201ENSMUST00000195269 178 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Gm38167-201ENSMUST00000195704 1178 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Gm44373-201ENSMUST00000196112 169 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Gm42578-201ENSMUST00000199960 194 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 AC167229.1-201ENSMUST00000220057 469 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Snord42a-201ENSMUST00000082606 65 ntBASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ddb1Q3U1J4 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Gm45540-201ENSMUST00000209271 3606 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Gm38706-201ENSMUST00000182397 2617 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Gm9059-201ENSMUST00000118319 183 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Gm15167-201ENSMUST00000121997 187 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Gm22038-201ENSMUST00000157277 242 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Gm8207-201ENSMUST00000171204 502 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Gm3370-201ENSMUST00000171785 500 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Gm20534-201ENSMUST00000172957 172 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Gm20651-201ENSMUST00000177219 329 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Gm27245-201ENSMUST00000184385 376 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Mir8106-201ENSMUST00000184520 139 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Gm29574-201ENSMUST00000186226 696 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Gm28828-201ENSMUST00000186601 696 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Gm28159-201ENSMUST00000190296 696 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Gm6059-201ENSMUST00000196903 340 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Mir691-201ENSMUST00000199719 78 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 AC155839.1-201ENSMUST00000200105 147 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 n-R5s40-201ENSMUST00000082475 124 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.07□□□□□ -1.76
Ddb1Q3U1J4 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 Gm22496-201ENSMUST00000104493 88 ntBASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 Gm14972-201ENSMUST00000121780 364 ntBASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 Gm22085-201ENSMUST00000158344 110 ntBASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 Gm24552-201ENSMUST00000158646 103 ntBASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 Gm10075-201ENSMUST00000162030 545 ntBASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 Gm25175-201ENSMUST00000178712 79 ntBASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 Gm29231-201ENSMUST00000179850 319 ntBASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 Gm25284-201ENSMUST00000180345 141 ntBASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 Gm43746-201ENSMUST00000200028 317 ntBASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ddb1Q3U1J4 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm7164-201ENSMUST00000117503 450 ntBASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm14287-201ENSMUST00000121060 117 ntBASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm15244-201ENSMUST00000121122 130 ntBASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm14980-201ENSMUST00000121247 736 ntBASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm12779-201ENSMUST00000121496 143 ntBASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm5958-201ENSMUST00000147698 297 ntBASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm24930-201ENSMUST00000158315 83 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms