Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.12□□□□□ -2.07
Ctdnep1Q3TP92 Mir30d-201ENSMUST00000083503 82 ntBASIC2.12□□□□□ -2.07
Ctdnep1Q3TP92 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.12□□□□□ -2.07
Ctdnep1Q3TP92 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Ctdnep1Q3TP92 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm26154-201ENSMUST00000102339 96 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm25090-201ENSMUST00000104000 132 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm14835-201ENSMUST00000119039 315 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm12825-201ENSMUST00000120249 563 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm26186-201ENSMUST00000157689 125 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm23813-201ENSMUST00000175153 77 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm24100-201ENSMUST00000178592 79 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm26189-201ENSMUST00000179879 107 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm24137-201ENSMUST00000180055 79 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm22391-201ENSMUST00000180356 79 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Mir6382-201ENSMUST00000184055 110 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm28283-201ENSMUST00000185509 178 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm29550-201ENSMUST00000185543 285 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm29073-201ENSMUST00000185563 664 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm29263-201ENSMUST00000188718 463 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm29165-201ENSMUST00000190655 664 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm29211-201ENSMUST00000191470 664 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm45173-201ENSMUST00000206819 305 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm18160-201ENSMUST00000214279 827 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 AC156560.1-201ENSMUST00000221425 256 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 AC170810.3-201ENSMUST00000226177 374 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 AC166344.2-201ENSMUST00000226747 374 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Gm22740-201ENSMUST00000083439 109 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.11□□□□□ -2.07
Ctdnep1Q3TP92 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 Gm14588-201ENSMUST00000119895 172 ntBASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 Gm14867-201ENSMUST00000120156 866 ntBASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 Gm14411-201ENSMUST00000121798 914 ntBASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 Gm11358-201ENSMUST00000122310 373 ntBASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 Gm25391-201ENSMUST00000157342 134 ntBASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 Mir3066-201ENSMUST00000175296 83 ntBASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 Mir6371-201ENSMUST00000184470 111 ntBASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 Gm28163-201ENSMUST00000187099 325 ntBASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 AC167192.4-201ENSMUST00000224087 993 ntBASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Ctdnep1Q3TP92 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm17132-201ENSMUST00000109542 1158 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm22709-201ENSMUST00000116893 111 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm11784-201ENSMUST00000118568 474 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Trav20-201ENSMUST00000142754 347 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm24910-201ENSMUST00000157289 272 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm22227-201ENSMUST00000157356 259 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm22733-201ENSMUST00000158094 91 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm23352-201ENSMUST00000158428 64 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm9593-201ENSMUST00000166034 469 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm25156-201ENSMUST00000179809 79 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Mir6338-201ENSMUST00000183389 109 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm29192-201ENSMUST00000190942 377 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm38044-201ENSMUST00000192964 487 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm43582-201ENSMUST00000196149 343 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm44181-201ENSMUST00000203106 483 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 AC101677.1-201ENSMUST00000218590 158 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm46994-201ENSMUST00000221523 219 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm5955-201ENSMUST00000222712 219 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm26206-201ENSMUST00000082908 110 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm24610-201ENSMUST00000083270 109 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Gm24490-201ENSMUST00000083803 98 ntBASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Ctdnep1Q3TP92 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
Ctdnep1Q3TP92 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Ctdnep1Q3TP92 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms