Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm27896-201ENSMUST00000175162 317 ntBASIC3.68□□□□□ -1.82
Sf3b6P59708 Gm27568-201ENSMUST00000184220 99 ntBASIC3.68□□□□□ -1.82
Sf3b6P59708 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC3.68□□□□□ -1.82
Sf3b6P59708 Gm27564-201ENSMUST00000185196 96 ntBASIC3.68□□□□□ -1.82
Sf3b6P59708 Gm23370-202ENSMUST00000197008 129 ntBASIC3.68□□□□□ -1.82
Sf3b6P59708 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC3.68□□□□□ -1.82
Sf3b6P59708 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.68□□□□□ -1.82
Sf3b6P59708 Gm44533-201ENSMUST00000207782 268 ntBASIC3.68□□□□□ -1.82
Sf3b6P59708 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC3.68□□□□□ -1.82
Sf3b6P59708 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.68□□□□□ -1.82
Sf3b6P59708 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.68□□□□□ -1.82
Sf3b6P59708 Gm25930-201ENSMUST00000082785 107 ntBASIC3.68□□□□□ -1.82
Sf3b6P59708 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Sf3b6P59708 Gm7381-201ENSMUST00000098958 300 ntBASIC3.68□□□□□ -1.82
Sf3b6P59708 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Sf3b6P59708 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.68□□□□□ -1.82
Sf3b6P59708 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.68□□□□□ -1.82
Sf3b6P59708 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Sf3b6P59708 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Sf3b6P59708 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Sf3b6P59708 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.68□□□□□ -1.82
Sf3b6P59708 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Sf3b6P59708 Gm14816-201ENSMUST00000117174 294 ntBASIC3.67□□□□□ -1.82
Sf3b6P59708 Gm14878-201ENSMUST00000118167 293 ntBASIC3.67□□□□□ -1.82
Sf3b6P59708 Gm14688-201ENSMUST00000119169 303 ntBASIC3.67□□□□□ -1.82
Sf3b6P59708 Gm15162-201ENSMUST00000119325 283 ntBASIC3.67□□□□□ -1.82
Sf3b6P59708 Gm11931-201ENSMUST00000121630 447 ntBASIC3.67□□□□□ -1.82
Sf3b6P59708 Gm25107-201ENSMUST00000122472 129 ntBASIC3.67□□□□□ -1.82
Sf3b6P59708 Gm23585-201ENSMUST00000157656 102 ntBASIC3.67□□□□□ -1.82
Sf3b6P59708 Gm22536-201ENSMUST00000158171 134 ntBASIC3.67□□□□□ -1.82
Sf3b6P59708 Gm27805-201ENSMUST00000184513 79 ntBASIC3.67□□□□□ -1.82
Sf3b6P59708 Gm27690-201ENSMUST00000184596 126 ntBASIC3.67□□□□□ -1.82
Sf3b6P59708 Mir6715-201ENSMUST00000184990 57 ntBASIC3.67□□□□□ -1.82
Sf3b6P59708 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.67□□□□□ -1.82
Sf3b6P59708 Mir7682-201ENSMUST00000198467 58 ntBASIC3.67□□□□□ -1.82
Sf3b6P59708 Gm44594-201ENSMUST00000208982 407 ntBASIC3.67□□□□□ -1.82
Sf3b6P59708 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.67□□□□□ -1.82
Sf3b6P59708 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC3.67□□□□□ -1.82
Sf3b6P59708 Mir181b-2-201ENSMUST00000083644 89 ntBASIC3.67□□□□□ -1.82
Sf3b6P59708 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Sf3b6P59708 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Sf3b6P59708 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Sf3b6P59708 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC3.67□□□□□ -1.82
Sf3b6P59708 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.67□□□□□ -1.82
Sf3b6P59708 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Sf3b6P59708 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Sf3b6P59708 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sf3b6P59708 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sf3b6P59708 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Sf3b6P59708 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm15846-201ENSMUST00000116022 320 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm23653-201ENSMUST00000116751 97 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm13355-201ENSMUST00000117996 317 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm12793-201ENSMUST00000119268 292 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm13992-201ENSMUST00000120558 156 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm24392-201ENSMUST00000158136 103 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Mir1947-201ENSMUST00000158235 85 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm24667-201ENSMUST00000158938 103 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm16326-201ENSMUST00000162843 414 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm22450-201ENSMUST00000179641 107 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm25473-201ENSMUST00000180191 107 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm27286-201ENSMUST00000184934 179 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm42451-201ENSMUST00000197410 244 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm17951-201ENSMUST00000198536 496 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm43651-201ENSMUST00000199796 439 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.66□□□□□ -1.82
Sf3b6P59708 Mecom-201ENSMUST00000061088 348 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm24856-201ENSMUST00000082809 107 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm26071-201ENSMUST00000083261 107 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Mir208a-201ENSMUST00000083498 83 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm24521-201ENSMUST00000083958 107 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sf3b6P59708 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Sf3b6P59708 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.66□□□□□ -1.82
Sf3b6P59708 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Sf3b6P59708 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Sf3b6P59708 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sf3b6P59708 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Sf3b6P59708 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Sf3b6P59708 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Sf3b6P59708 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.65□□□□□ -1.82
Sf3b6P59708 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.65□□□□□ -1.82
Sf3b6P59708 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Sf3b6P59708 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Sf3b6P59708 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
Sf3b6P59708 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC3.65□□□□□ -1.82
Sf3b6P59708 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.65□□□□□ -1.82
Sf3b6P59708 Gm24282-201ENSMUST00000104232 66 ntBASIC3.65□□□□□ -1.83
Sf3b6P59708 Gm14518-201ENSMUST00000117351 542 ntBASIC3.65□□□□□ -1.83
Sf3b6P59708 Gm22027-201ENSMUST00000122737 127 ntBASIC3.65□□□□□ -1.83
Sf3b6P59708 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.65□□□□□ -1.83
Sf3b6P59708 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC3.65□□□□□ -1.83
Sf3b6P59708 Gm28020-201ENSMUST00000157739 67 ntBASIC3.65□□□□□ -1.83
Sf3b6P59708 Gm24726-201ENSMUST00000158232 121 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms