Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Trav12-4-201ENSMUST00000200663 271 ntBASIC1.61□□□□□ -2.15
Cux1P53564 Gm45365-201ENSMUST00000209489 256 ntBASIC1.61□□□□□ -2.15
Cux1P53564 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Cux1P53564 Gm24445-201ENSMUST00000083981 107 ntBASIC1.61□□□□□ -2.15
Cux1P53564 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC1.61□□□□□ -2.15
Cux1P53564 Gm23991-201ENSMUST00000117033 93 ntBASIC1.61□□□□□ -2.15
Cux1P53564 Gm22945-201ENSMUST00000158557 157 ntBASIC1.61□□□□□ -2.15
Cux1P53564 Gm26363-201ENSMUST00000158866 83 ntBASIC1.61□□□□□ -2.15
Cux1P53564 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC1.61□□□□□ -2.15
Cux1P53564 AC124746.1-201ENSMUST00000227535 1300 ntBASIC1.6□□□□□ -2.15
Cux1P53564 Gm11252-201ENSMUST00000120572 939 ntBASIC1.6□□□□□ -2.15
Cux1P53564 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC1.6□□□□□ -2.15
Cux1P53564 Gm26089-201ENSMUST00000157898 107 ntBASIC1.6□□□□□ -2.15
Cux1P53564 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Cux1P53564 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC1.6□□□□□ -2.15
Cux1P53564 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.6□□□□□ -2.15
Cux1P53564 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Cux1P53564 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Cux1P53564 Gm14748-201ENSMUST00000119819 411 ntBASIC1.59□□□□□ -2.16
Cux1P53564 Gm13080-201ENSMUST00000120556 420 ntBASIC1.59□□□□□ -2.16
Cux1P53564 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.59□□□□□ -2.16
Cux1P53564 Gm24288-201ENSMUST00000157630 144 ntBASIC1.59□□□□□ -2.16
Cux1P53564 Gm17162-201ENSMUST00000168538 473 ntBASIC1.59□□□□□ -2.16
Cux1P53564 Gm5709-201ENSMUST00000177879 1165 ntBASIC1.59□□□□□ -2.16
Cux1P53564 Gm29184-201ENSMUST00000190038 334 ntBASIC1.59□□□□□ -2.16
Cux1P53564 Gm21064-202ENSMUST00000190583 278 ntBASIC1.59□□□□□ -2.16
Cux1P53564 Ighv1-6-201ENSMUST00000193849 293 ntBASIC1.59□□□□□ -2.16
Cux1P53564 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Cux1P53564 Gm43345-201ENSMUST00000199484 269 ntBASIC1.59□□□□□ -2.16
Cux1P53564 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC1.59□□□□□ -2.16
Cux1P53564 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.59□□□□□ -2.16
Cux1P53564 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.59□□□□□ -2.16
Cux1P53564 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Cux1P53564 Gm23846-201ENSMUST00000083835 107 ntBASIC1.59□□□□□ -2.16
Cux1P53564 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.58□□□□□ -2.16
Cux1P53564 Gm14073-201ENSMUST00000117344 381 ntBASIC1.58□□□□□ -2.16
Cux1P53564 Gm6954-201ENSMUST00000117416 225 ntBASIC1.58□□□□□ -2.16
Cux1P53564 Gm13806-201ENSMUST00000117822 325 ntBASIC1.58□□□□□ -2.16
Cux1P53564 Gm5287-201ENSMUST00000120666 598 ntBASIC1.58□□□□□ -2.16
Cux1P53564 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Cux1P53564 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.58□□□□□ -2.16
Cux1P53564 Gm22485-201ENSMUST00000157990 109 ntBASIC1.58□□□□□ -2.16
Cux1P53564 Gm24304-201ENSMUST00000177635 107 ntBASIC1.58□□□□□ -2.16
Cux1P53564 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Cux1P53564 Gm44295-201ENSMUST00000203805 437 ntBASIC1.58□□□□□ -2.16
Cux1P53564 Mir93-201ENSMUST00000083593 88 ntBASIC1.58□□□□□ -2.16
Cux1P53564 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.57□□□□□ -2.16
Cux1P53564 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Cux1P53564 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Cux1P53564 Gm11854-201ENSMUST00000117839 446 ntBASIC1.57□□□□□ -2.16
Cux1P53564 Gm22037-201ENSMUST00000157280 296 ntBASIC1.57□□□□□ -2.16
Cux1P53564 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
Cux1P53564 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Cux1P53564 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.57□□□□□ -2.16
Cux1P53564 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Cux1P53564 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.57□□□□□ -2.16
Cux1P53564 AC155314.1-201ENSMUST00000227624 508 ntBASIC1.57□□□□□ -2.16
Cux1P53564 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC1.57□□□□□ -2.16
Cux1P53564 Gm24151-201ENSMUST00000082758 141 ntBASIC1.57□□□□□ -2.16
Cux1P53564 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.57□□□□□ -2.16
Cux1P53564 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
Cux1P53564 Gm5583-201ENSMUST00000174328 1519 ntBASIC1.57□□□□□ -2.16
Cux1P53564 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Cux1P53564 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Cux1P53564 Gm11898-201ENSMUST00000117161 385 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Gm14670-201ENSMUST00000117327 337 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Gm14411-201ENSMUST00000121798 914 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.56□□□□□ -2.16
Cux1P53564 Gm26105-201ENSMUST00000157253 190 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Gm22483-201ENSMUST00000157986 274 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Cux1P53564 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Gm18956-201ENSMUST00000192857 480 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.56□□□□□ -2.16
Cux1P53564 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Cux1P53564 Mir325-201ENSMUST00000083491 98 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Mir27b-201ENSMUST00000083541 73 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.56□□□□□ -2.16
Cux1P53564 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Cux1P53564 Mir804-201ENSMUST00000103251 95 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Gm12235-201ENSMUST00000118596 170 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Gm13903-201ENSMUST00000120945 193 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Gm12327-201ENSMUST00000121729 1168 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Gm24911-201ENSMUST00000157292 136 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Gm3724-201ENSMUST00000197957 349 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Gm44462-201ENSMUST00000199696 129 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Gm44830-201ENSMUST00000207667 584 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Gm18414-201ENSMUST00000210858 694 ntBASIC1.56□□□□□ -2.16
Cux1P53564 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Mir137-201ENSMUST00000083635 73 ntBASIC1.56□□□□□ -2.16
Cux1P53564 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Cux1P53564 Gm13876-201ENSMUST00000118451 261 ntBASIC1.55□□□□□ -2.16
Cux1P53564 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Cux1P53564 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Cux1P53564 Gm25368-201ENSMUST00000158847 131 ntBASIC1.55□□□□□ -2.16
Cux1P53564 Gm25166-201ENSMUST00000158909 111 ntBASIC1.55□□□□□ -2.16
Cux1P53564 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.55□□□□□ -2.16
Cux1P53564 Gm19649-201ENSMUST00000201126 822 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms