Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Mir5101-201ENSMUST00000175181 83 ntBASIC3.53□□□□□ -1.84
Ercc3P49135 Gm18588-201ENSMUST00000177308 492 ntBASIC3.53□□□□□ -1.84
Ercc3P49135 Gm24019-201ENSMUST00000178620 107 ntBASIC3.53□□□□□ -1.84
Ercc3P49135 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Ercc3P49135 Gm26243-201ENSMUST00000179260 107 ntBASIC3.53□□□□□ -1.84
Ercc3P49135 Gm27527-201ENSMUST00000183903 99 ntBASIC3.53□□□□□ -1.84
Ercc3P49135 Gm27490-201ENSMUST00000184754 128 ntBASIC3.53□□□□□ -1.84
Ercc3P49135 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC3.53□□□□□ -1.84
Ercc3P49135 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.53□□□□□ -1.84
Ercc3P49135 Gm44465-201ENSMUST00000199536 114 ntBASIC3.53□□□□□ -1.84
Ercc3P49135 Gm43367-201ENSMUST00000199986 625 ntBASIC3.53□□□□□ -1.84
Ercc3P49135 Gm7039-201ENSMUST00000205138 346 ntBASIC3.53□□□□□ -1.84
Ercc3P49135 Gm19140-201ENSMUST00000209790 421 ntBASIC3.53□□□□□ -1.84
Ercc3P49135 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.53□□□□□ -1.84
Ercc3P49135 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.53□□□□□ -1.84
Ercc3P49135 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC3.53□□□□□ -1.84
Ercc3P49135 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.53□□□□□ -1.84
Ercc3P49135 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.53□□□□□ -1.84
Ercc3P49135 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Ercc3P49135 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Ercc3P49135 Gm23296-201ENSMUST00000082555 107 ntBASIC3.53□□□□□ -1.84
Ercc3P49135 Gm24859-201ENSMUST00000082729 107 ntBASIC3.53□□□□□ -1.84
Ercc3P49135 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Ercc3P49135 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Ercc3P49135 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Ercc3P49135 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.53□□□□□ -1.84
Ercc3P49135 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
Ercc3P49135 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.53□□□□□ -1.85
Ercc3P49135 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Ercc3P49135 Gm37903-201ENSMUST00000192122 2381 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
Ercc3P49135 Gm11065-201ENSMUST00000111462 228 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 Gm13329-201ENSMUST00000117063 265 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 Gm13806-201ENSMUST00000117822 325 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 Gm16021-201ENSMUST00000121176 219 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Ercc3P49135 Gm23137-201ENSMUST00000157559 107 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 Gm15914-201ENSMUST00000161922 309 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.52□□□□□ -1.85
Ercc3P49135 Gm17166-201ENSMUST00000172006 431 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 Gm9892-201ENSMUST00000182415 992 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 Gm27582-201ENSMUST00000184084 126 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 Gm28282-201ENSMUST00000186072 186 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 Gm28779-201ENSMUST00000189678 323 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 Gm37616-201ENSMUST00000193974 322 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 Gm43355-201ENSMUST00000196541 346 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.52□□□□□ -1.85
Ercc3P49135 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 AC167192.2-201ENSMUST00000224794 198 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 AC117656.1-201ENSMUST00000225826 339 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 Gm26263-201ENSMUST00000083281 164 ntBASIC3.52□□□□□ -1.85
Ercc3P49135 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Ercc3P49135 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.51□□□□□ -1.85
Ercc3P49135 Mir878-201ENSMUST00000104680 78 ntBASIC3.51□□□□□ -1.85
Ercc3P49135 Gm14877-201ENSMUST00000119803 478 ntBASIC3.51□□□□□ -1.85
Ercc3P49135 Gm15986-201ENSMUST00000122153 400 ntBASIC3.51□□□□□ -1.85
Ercc3P49135 Gm6265-201ENSMUST00000149263 231 ntBASIC3.51□□□□□ -1.85
Ercc3P49135 Gm26159-201ENSMUST00000158968 104 ntBASIC3.51□□□□□ -1.85
Ercc3P49135 Gm17187-201ENSMUST00000164622 410 ntBASIC3.51□□□□□ -1.85
Ercc3P49135 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Ercc3P49135 Gm26335-201ENSMUST00000178449 107 ntBASIC3.51□□□□□ -1.85
Ercc3P49135 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Ercc3P49135 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Ercc3P49135 Gm23862-201ENSMUST00000180342 94 ntBASIC3.51□□□□□ -1.85
Ercc3P49135 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Ercc3P49135 Gm36953-201ENSMUST00000195295 268 ntBASIC3.51□□□□□ -1.85
Ercc3P49135 Igkv13-64-201ENSMUST00000198143 343 ntBASIC3.51□□□□□ -1.85
Ercc3P49135 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Ercc3P49135 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.51□□□□□ -1.85
Ercc3P49135 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Ercc3P49135 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Ercc3P49135 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ercc3P49135 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.51□□□□□ -1.85
Ercc3P49135 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Ercc3P49135 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.5□□□□□ -1.85
Ercc3P49135 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ercc3P49135 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
Ercc3P49135 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.5□□□□□ -1.85
Ercc3P49135 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
Ercc3P49135 Gm12876-201ENSMUST00000120975 408 ntBASIC3.5□□□□□ -1.85
Ercc3P49135 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC3.5□□□□□ -1.85
Ercc3P49135 Gm22668-201ENSMUST00000158716 260 ntBASIC3.5□□□□□ -1.85
Ercc3P49135 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Ercc3P49135 Gm22858-201ENSMUST00000174972 76 ntBASIC3.5□□□□□ -1.85
Ercc3P49135 Gm22131-201ENSMUST00000178415 94 ntBASIC3.5□□□□□ -1.85
Ercc3P49135 Gm26622-201ENSMUST00000180520 298 ntBASIC3.5□□□□□ -1.85
Ercc3P49135 Mir6917-201ENSMUST00000184111 61 ntBASIC3.5□□□□□ -1.85
Ercc3P49135 Gm18291-201ENSMUST00000190791 301 ntBASIC3.5□□□□□ -1.85
Ercc3P49135 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.5□□□□□ -1.85
Ercc3P49135 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.5□□□□□ -1.85
Ercc3P49135 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.5□□□□□ -1.85
Ercc3P49135 Gm45395-201ENSMUST00000209891 559 ntBASIC3.5□□□□□ -1.85
Ercc3P49135 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.5□□□□□ -1.85
Ercc3P49135 Olfr575-201ENSMUST00000084812 957 ntBASIC3.5□□□□□ -1.85
Ercc3P49135 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Ercc3P49135 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ercc3P49135 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms