Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Rfx1P48377 Gm13268-201ENSMUST00000117485 433 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Gm13868-201ENSMUST00000122411 294 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Gm23713-201ENSMUST00000157353 70 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Gm24997-201ENSMUST00000157910 105 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Gm22615-201ENSMUST00000158102 70 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Gm23023-201ENSMUST00000158767 109 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Gm23215-201ENSMUST00000178153 121 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Mir6391-201ENSMUST00000184391 104 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Mir6933-201ENSMUST00000184982 81 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Gm8296-201ENSMUST00000185597 524 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Gm29334-201ENSMUST00000190334 357 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Gm10400-201ENSMUST00000203920 3835 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Gm4045-201ENSMUST00000204076 310 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 AC164161.1-201ENSMUST00000214076 639 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Gm18921-201ENSMUST00000221798 366 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Mir133a-1-201ENSMUST00000083465 68 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Rfx1P48377 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Rfx1P48377 Gm15102-201ENSMUST00000118740 1502 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Gm43404-201ENSMUST00000200424 2534 ntBASIC4.66□□□□□ -1.66
Rfx1P48377 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
Rfx1P48377 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Rfx1P48377 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.65□□□□□ -1.66
Rfx1P48377 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
Rfx1P48377 Gm26500-201ENSMUST00000101867 106 ntBASIC4.65□□□□□ -1.67
Rfx1P48377 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Rfx1P48377 Gm26476-201ENSMUST00000122618 313 ntBASIC4.65□□□□□ -1.67
Rfx1P48377 Gm23905-201ENSMUST00000157568 109 ntBASIC4.65□□□□□ -1.67
Rfx1P48377 Gm23198-201ENSMUST00000158811 91 ntBASIC4.65□□□□□ -1.67
Rfx1P48377 Gm16289-201ENSMUST00000162079 183 ntBASIC4.65□□□□□ -1.67
Rfx1P48377 Mir7074-201ENSMUST00000183884 63 ntBASIC4.65□□□□□ -1.67
Rfx1P48377 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Rfx1P48377 Gm4644-201ENSMUST00000197587 400 ntBASIC4.65□□□□□ -1.67
Rfx1P48377 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC4.65□□□□□ -1.67
Rfx1P48377 Gm44757-201ENSMUST00000206373 157 ntBASIC4.65□□□□□ -1.67
Rfx1P48377 Gm25078-201ENSMUST00000082530 107 ntBASIC4.65□□□□□ -1.67
Rfx1P48377 Gm22620-201ENSMUST00000082700 133 ntBASIC4.65□□□□□ -1.67
Rfx1P48377 Mir32-201ENSMUST00000083610 70 ntBASIC4.65□□□□□ -1.67
Rfx1P48377 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
Rfx1P48377 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.64□□□□□ -1.67
Rfx1P48377 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Rfx1P48377 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Rfx1P48377 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.64□□□□□ -1.67
Rfx1P48377 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Rfx1P48377 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Rfx1P48377 Mir465b-1-201ENSMUST00000103940 79 ntBASIC4.64□□□□□ -1.67
Rfx1P48377 Mir465b-2-201ENSMUST00000104662 79 ntBASIC4.64□□□□□ -1.67
Rfx1P48377 Gm7123-201ENSMUST00000117647 213 ntBASIC4.64□□□□□ -1.67
Rfx1P48377 Gm12793-201ENSMUST00000119268 292 ntBASIC4.64□□□□□ -1.67
Rfx1P48377 Gm13852-201ENSMUST00000122350 242 ntBASIC4.64□□□□□ -1.67
Rfx1P48377 Gm25107-201ENSMUST00000122472 129 ntBASIC4.64□□□□□ -1.67
Rfx1P48377 Gm22521-201ENSMUST00000158272 134 ntBASIC4.64□□□□□ -1.67
Rfx1P48377 Gm26028-201ENSMUST00000158660 294 ntBASIC4.64□□□□□ -1.67
Rfx1P48377 AC165106.2-201ENSMUST00000226749 97 ntBASIC4.64□□□□□ -1.67
Rfx1P48377 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Rfx1P48377 Gm22062-201ENSMUST00000082563 107 ntBASIC4.64□□□□□ -1.67
Rfx1P48377 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Rfx1P48377 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Rfx1P48377 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Rfx1P48377 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
Rfx1P48377 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Rfx1P48377 Gm13355-201ENSMUST00000117996 317 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 Gm13831-201ENSMUST00000118764 302 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 Gm13737-201ENSMUST00000119793 232 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 Gm11931-201ENSMUST00000121630 447 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 Gm22988-201ENSMUST00000122759 144 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC4.63□□□□□ -1.67
Rfx1P48377 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.63□□□□□ -1.67
Rfx1P48377 Gm23901-201ENSMUST00000157570 107 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 Gm24014-201ENSMUST00000157728 157 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 Gm22789-201ENSMUST00000157884 130 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 Gm23864-201ENSMUST00000177607 107 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 Mir6996-201ENSMUST00000183922 61 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Rfx1P48377 Gm28849-201ENSMUST00000188127 174 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 Gm29140-201ENSMUST00000190187 476 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 Gm28330-201ENSMUST00000190353 171 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 Gm42578-201ENSMUST00000199960 194 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 Gm7468-201ENSMUST00000203900 652 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.63□□□□□ -1.67
Rfx1P48377 AC155712.1-201ENSMUST00000219704 160 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 AC123533.1-201ENSMUST00000227782 446 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 Gm26314-201ENSMUST00000083891 107 ntBASIC4.63□□□□□ -1.67
Rfx1P48377 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Rfx1P48377 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.62□□□□□ -1.67
Rfx1P48377 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Rfx1P48377 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Rfx1P48377 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Rfx1P48377 Gm4736-201ENSMUST00000100870 380 ntBASIC4.62□□□□□ -1.67
Rfx1P48377 Gm23697-201ENSMUST00000103897 110 ntBASIC4.62□□□□□ -1.67
Rfx1P48377 Gm25875-201ENSMUST00000104323 107 ntBASIC4.62□□□□□ -1.67
Rfx1P48377 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Rfx1P48377 Gm13581-201ENSMUST00000120675 278 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 112.4 ms