Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
HttP42859 Gm11819-201ENSMUST00000122192 372 ntBASIC0.7□□□□□ -2.3
HttP42859 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC0.7□□□□□ -2.3
HttP42859 Gm26354-201ENSMUST00000158221 129 ntBASIC0.7□□□□□ -2.3
HttP42859 Gm2446-201ENSMUST00000220144 772 ntBASIC0.7□□□□□ -2.3
HttP42859 AC079644.1-201ENSMUST00000220586 405 ntBASIC0.7□□□□□ -2.3
HttP42859 Gm12507-201ENSMUST00000119155 415 ntBASIC0.69□□□□□ -2.3
HttP42859 Gm14905-201ENSMUST00000122351 639 ntBASIC0.69□□□□□ -2.3
HttP42859 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC0.69□□□□□ -2.3
HttP42859 Gm45192-201ENSMUST00000206749 283 ntBASIC0.69□□□□□ -2.3
HttP42859 Gm45696-201ENSMUST00000212088 985 ntBASIC0.69□□□□□ -2.3
HttP42859 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
HttP42859 Gm11898-201ENSMUST00000117161 385 ntBASIC0.69□□□□□ -2.3
HttP42859 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC0.69□□□□□ -2.3
HttP42859 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC0.69□□□□□ -2.3
HttP42859 Gm20409-201ENSMUST00000173457 130 ntBASIC0.69□□□□□ -2.3
HttP42859 Gm18855-201ENSMUST00000206689 570 ntBASIC0.69□□□□□ -2.3
HttP42859 Gm24372-201ENSMUST00000104400 110 ntBASIC0.69□□□□□ -2.3
HttP42859 n-R5s26-201ENSMUST00000104601 122 ntBASIC0.69□□□□□ -2.3
HttP42859 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.69□□□□□ -2.3
HttP42859 Gm27733-201ENSMUST00000184803 68 ntBASIC0.69□□□□□ -2.3
HttP42859 Gm45116-201ENSMUST00000207392 275 ntBASIC0.69□□□□□ -2.3
HttP42859 Gm6109-201ENSMUST00000223297 348 ntBASIC0.69□□□□□ -2.3
HttP42859 Gm10298-201ENSMUST00000074801 265 ntBASIC0.69□□□□□ -2.3
HttP42859 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
HttP42859 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
HttP42859 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC0.69□□□□□ -2.3
HttP42859 Gm11891-201ENSMUST00000121241 619 ntBASIC0.68□□□□□ -2.3
HttP42859 Gm42581-201ENSMUST00000201774 966 ntBASIC0.68□□□□□ -2.3
HttP42859 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
HttP42859 Gm24861-201ENSMUST00000083459 107 ntBASIC0.68□□□□□ -2.3
HttP42859 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
HttP42859 Gm15001-201ENSMUST00000117657 795 ntBASIC0.67□□□□□ -2.3
HttP42859 Gm23718-201ENSMUST00000157350 307 ntBASIC0.67□□□□□ -2.3
HttP42859 Gm23672-201ENSMUST00000157471 107 ntBASIC0.67□□□□□ -2.3
HttP42859 Gm22515-201ENSMUST00000158273 305 ntBASIC0.67□□□□□ -2.3
HttP42859 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC0.67□□□□□ -2.3
HttP42859 Gm18416-201ENSMUST00000175635 1003 ntBASIC0.67□□□□□ -2.3
HttP42859 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
HttP42859 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
HttP42859 Gm25047-201ENSMUST00000122667 104 ntBASIC0.67□□□□□ -2.3
HttP42859 Gm24296-201ENSMUST00000158297 106 ntBASIC0.67□□□□□ -2.3
HttP42859 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.67□□□□□ -2.3
HttP42859 Gm18611-201ENSMUST00000200334 1118 ntBASIC0.67□□□□□ -2.3
HttP42859 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC0.67□□□□□ -2.3
HttP42859 Gm25772-201ENSMUST00000158574 56 ntBASIC0.67□□□□□ -2.3
HttP42859 Gm16490-201ENSMUST00000165299 351 ntBASIC0.67□□□□□ -2.3
HttP42859 Gm42438-201ENSMUST00000197832 974 ntBASIC0.67□□□□□ -2.3
HttP42859 Crs-ps-201ENSMUST00000203723 760 ntBASIC0.67□□□□□ -2.3
HttP42859 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.66□□□□□ -2.3
HttP42859 Gm37219-201ENSMUST00000192036 926 ntBASIC0.66□□□□□ -2.3
HttP42859 Gm37817-201ENSMUST00000195276 434 ntBASIC0.66□□□□□ -2.3
HttP42859 Gm18338-201ENSMUST00000222381 560 ntBASIC0.66□□□□□ -2.3
HttP42859 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
HttP42859 Gm29492-201ENSMUST00000187124 457 ntBASIC0.66□□□□□ -2.3
HttP42859 Gm44818-201ENSMUST00000206608 358 ntBASIC0.66□□□□□ -2.3
HttP42859 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC0.66□□□□□ -2.3
HttP42859 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
HttP42859 Gm17976-201ENSMUST00000184037 1909 ntBASIC0.65□□□□□ -2.3
HttP42859 Gm22689-201ENSMUST00000102452 110 ntBASIC0.65□□□□□ -2.3
HttP42859 Gm24468-201ENSMUST00000104489 104 ntBASIC0.65□□□□□ -2.3
HttP42859 Gm40810-201ENSMUST00000219149 253 ntBASIC0.65□□□□□ -2.3
HttP42859 Gm20630-201ENSMUST00000177387 551 ntBASIC0.65□□□□□ -2.31
HttP42859 Gm27517-201ENSMUST00000184347 236 ntBASIC0.65□□□□□ -2.31
HttP42859 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC0.65□□□□□ -2.31
HttP42859 AC123860.1-201ENSMUST00000228033 481 ntBASIC0.65□□□□□ -2.31
HttP42859 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC0.65□□□□□ -2.31
HttP42859 AC069074.1-201ENSMUST00000220048 381 ntBASIC0.64□□□□□ -2.31
HttP42859 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.64□□□□□ -2.31
HttP42859 Gm22026-201ENSMUST00000122735 281 ntBASIC0.64□□□□□ -2.31
HttP42859 Gm44211-201ENSMUST00000204867 145 ntBASIC0.64□□□□□ -2.31
HttP42859 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC0.64□□□□□ -2.31
HttP42859 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC0.64□□□□□ -2.31
HttP42859 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC0.64□□□□□ -2.31
HttP42859 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC0.64□□□□□ -2.31
HttP42859 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC0.64□□□□□ -2.31
HttP42859 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
HttP42859 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC0.63□□□□□ -2.31
HttP42859 Gm15067-201ENSMUST00000119534 156 ntBASIC0.63□□□□□ -2.31
HttP42859 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC0.63□□□□□ -2.31
HttP42859 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
HttP42859 n-R5s202-201ENSMUST00000104517 114 ntBASIC0.63□□□□□ -2.31
HttP42859 Gm23469-201ENSMUST00000157131 104 ntBASIC0.63□□□□□ -2.31
HttP42859 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC0.63□□□□□ -2.31
HttP42859 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
HttP42859 Gm12235-201ENSMUST00000118596 170 ntBASIC0.62□□□□□ -2.31
HttP42859 Gm15112-201ENSMUST00000120152 860 ntBASIC0.62□□□□□ -2.31
HttP42859 Gm5277-201ENSMUST00000164923 556 ntBASIC0.62□□□□□ -2.31
HttP42859 Gm27943-201ENSMUST00000184844 116 ntBASIC0.62□□□□□ -2.31
HttP42859 Gm17935-201ENSMUST00000196649 772 ntBASIC0.62□□□□□ -2.31
HttP42859 Gm44483-201ENSMUST00000197203 97 ntBASIC0.62□□□□□ -2.31
HttP42859 Gm43991-201ENSMUST00000203751 274 ntBASIC0.62□□□□□ -2.31
HttP42859 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
HttP42859 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.62□□□□□ -2.31
HttP42859 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC0.62□□□□□ -2.31
HttP42859 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
HttP42859 Gm43115-201ENSMUST00000196244 160 ntBASIC0.62□□□□□ -2.31
HttP42859 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
HttP42859 Gm45365-201ENSMUST00000209489 256 ntBASIC0.62□□□□□ -2.31
HttP42859 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC0.62□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms