Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.03□□□□□ -1.92
Traf1P39428 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Traf1P39428 Gm22229-201ENSMUST00000082987 108 ntBASIC3.03□□□□□ -1.92
Traf1P39428 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.03□□□□□ -1.92
Traf1P39428 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Traf1P39428 AC134917.1-201ENSMUST00000220517 1449 ntBASIC3.02□□□□□ -1.93
Traf1P39428 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Traf1P39428 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Traf1P39428 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Traf1P39428 Gm24122-201ENSMUST00000104107 132 ntBASIC3.02□□□□□ -1.93
Traf1P39428 Gm14073-201ENSMUST00000117344 381 ntBASIC3.02□□□□□ -1.93
Traf1P39428 Gm14593-201ENSMUST00000119948 294 ntBASIC3.02□□□□□ -1.93
Traf1P39428 Gm5287-201ENSMUST00000120666 598 ntBASIC3.02□□□□□ -1.93
Traf1P39428 n-R5s80-201ENSMUST00000122596 111 ntBASIC3.02□□□□□ -1.93
Traf1P39428 Gm24546-201ENSMUST00000158652 102 ntBASIC3.02□□□□□ -1.93
Traf1P39428 Gm22500-201ENSMUST00000158982 99 ntBASIC3.02□□□□□ -1.93
Traf1P39428 Gm6788-201ENSMUST00000166459 270 ntBASIC3.02□□□□□ -1.93
Traf1P39428 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC3.02□□□□□ -1.93
Traf1P39428 Gm27817-201ENSMUST00000184302 233 ntBASIC3.02□□□□□ -1.93
Traf1P39428 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC3.02□□□□□ -1.93
Traf1P39428 Gm37727-201ENSMUST00000191637 819 ntBASIC3.02□□□□□ -1.93
Traf1P39428 Gm37533-201ENSMUST00000193848 545 ntBASIC3.02□□□□□ -1.93
Traf1P39428 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC3.02□□□□□ -1.93
Traf1P39428 Gm43264-201ENSMUST00000202284 325 ntBASIC3.02□□□□□ -1.93
Traf1P39428 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC3.02□□□□□ -1.93
Traf1P39428 Gm18000-201ENSMUST00000212153 800 ntBASIC3.02□□□□□ -1.93
Traf1P39428 AC153541.1-201ENSMUST00000213786 294 ntBASIC3.02□□□□□ -1.93
Traf1P39428 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.02□□□□□ -1.93
Traf1P39428 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Traf1P39428 Gm6030-201ENSMUST00000078768 402 ntBASIC3.02□□□□□ -1.93
Traf1P39428 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Traf1P39428 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Traf1P39428 AC122887.2-201ENSMUST00000219465 1603 ntBASIC3.01□□□□□ -1.93
Traf1P39428 Gm12393-201ENSMUST00000117084 848 ntBASIC3.01□□□□□ -1.93
Traf1P39428 Gm14887-201ENSMUST00000119522 663 ntBASIC3.01□□□□□ -1.93
Traf1P39428 Mir6335-201ENSMUST00000184081 98 ntBASIC3.01□□□□□ -1.93
Traf1P39428 Gm19193-201ENSMUST00000190263 590 ntBASIC3.01□□□□□ -1.93
Traf1P39428 Gm20915-201ENSMUST00000191575 663 ntBASIC3.01□□□□□ -1.93
Traf1P39428 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.01□□□□□ -1.93
Traf1P39428 Gm23247-201ENSMUST00000083373 107 ntBASIC3.01□□□□□ -1.93
Traf1P39428 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3□□□□□ -1.93
Traf1P39428 Gm18751-201ENSMUST00000185777 2013 ntBASIC3□□□□□ -1.93
Traf1P39428 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Traf1P39428 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC3□□□□□ -1.93
Traf1P39428 Gm11065-201ENSMUST00000111462 228 ntBASIC3□□□□□ -1.93
Traf1P39428 Gm12370-201ENSMUST00000117809 604 ntBASIC3□□□□□ -1.93
Traf1P39428 Gm14833-201ENSMUST00000118345 1027 ntBASIC3□□□□□ -1.93
Traf1P39428 Gm14785-201ENSMUST00000120185 539 ntBASIC3□□□□□ -1.93
Traf1P39428 Gm12042-201ENSMUST00000120479 301 ntBASIC3□□□□□ -1.93
Traf1P39428 Gm14765-201ENSMUST00000121954 326 ntBASIC3□□□□□ -1.93
Traf1P39428 Gm12071-201ENSMUST00000121968 469 ntBASIC3□□□□□ -1.93
Traf1P39428 Gm24839-201ENSMUST00000122602 107 ntBASIC3□□□□□ -1.93
Traf1P39428 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3□□□□□ -1.93
Traf1P39428 Gm23033-201ENSMUST00000157996 134 ntBASIC3□□□□□ -1.93
Traf1P39428 Gm2343-201ENSMUST00000161177 1042 ntBASIC3□□□□□ -1.93
Traf1P39428 Mir3075-201ENSMUST00000175340 85 ntBASIC3□□□□□ -1.93
Traf1P39428 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC3□□□□□ -1.93
Traf1P39428 Gm28000-201ENSMUST00000184380 85 ntBASIC3□□□□□ -1.93
Traf1P39428 Mir6363-201ENSMUST00000184880 114 ntBASIC3□□□□□ -1.93
Traf1P39428 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3□□□□□ -1.93
Traf1P39428 Gm17906-201ENSMUST00000202480 901 ntBASIC3□□□□□ -1.93
Traf1P39428 Gm44478-201ENSMUST00000204875 114 ntBASIC3□□□□□ -1.93
Traf1P39428 AC153957.1-201ENSMUST00000215235 229 ntBASIC3□□□□□ -1.93
Traf1P39428 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC3□□□□□ -1.93
Traf1P39428 AC138401.1-201ENSMUST00000221533 116 ntBASIC3□□□□□ -1.93
Traf1P39428 Gm23727-201ENSMUST00000083352 164 ntBASIC3□□□□□ -1.93
Traf1P39428 Gm37664-201ENSMUST00000194607 3813 ntBASIC3□□□□□ -1.93
Traf1P39428 Gm14843-201ENSMUST00000119596 212 ntBASIC2.99□□□□□ -1.93
Traf1P39428 Gm15266-201ENSMUST00000119635 255 ntBASIC2.99□□□□□ -1.93
Traf1P39428 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC2.99□□□□□ -1.93
Traf1P39428 Gm22651-201ENSMUST00000157872 94 ntBASIC2.99□□□□□ -1.93
Traf1P39428 Gm17538-201ENSMUST00000168236 327 ntBASIC2.99□□□□□ -1.93
Traf1P39428 Gm8114-201ENSMUST00000172225 484 ntBASIC2.99□□□□□ -1.93
Traf1P39428 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.99□□□□□ -1.93
Traf1P39428 Gm44011-201ENSMUST00000203336 394 ntBASIC2.99□□□□□ -1.93
Traf1P39428 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.99□□□□□ -1.93
Traf1P39428 AC124542.1-201ENSMUST00000205588 908 ntBASIC2.99□□□□□ -1.93
Traf1P39428 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.99□□□□□ -1.93
Traf1P39428 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.99□□□□□ -1.93
Traf1P39428 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.99□□□□□ -1.93
Traf1P39428 Gm23264-201ENSMUST00000083372 107 ntBASIC2.99□□□□□ -1.93
Traf1P39428 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.99□□□□□ -1.93
Traf1P39428 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Traf1P39428 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.98□□□□□ -1.93
Traf1P39428 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
Traf1P39428 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Traf1P39428 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Traf1P39428 Gm26341-201ENSMUST00000104561 134 ntBASIC2.98□□□□□ -1.93
Traf1P39428 Gm12513-201ENSMUST00000118617 352 ntBASIC2.98□□□□□ -1.93
Traf1P39428 Gm13804-201ENSMUST00000119552 172 ntBASIC2.98□□□□□ -1.93
Traf1P39428 Gm15029-201ENSMUST00000119742 199 ntBASIC2.98□□□□□ -1.93
Traf1P39428 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.98□□□□□ -1.93
Traf1P39428 Gm22038-201ENSMUST00000157277 242 ntBASIC2.98□□□□□ -1.93
Traf1P39428 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
Traf1P39428 Gm22851-201ENSMUST00000178741 94 ntBASIC2.98□□□□□ -1.93
Traf1P39428 Gm25074-201ENSMUST00000178782 94 ntBASIC2.98□□□□□ -1.93
Traf1P39428 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC2.98□□□□□ -1.93
Traf1P39428 Gm10193-201ENSMUST00000188288 231 ntBASIC2.98□□□□□ -1.93
Traf1P39428 Gm28648-201ENSMUST00000190092 343 ntBASIC2.98□□□□□ -1.93
Traf1P39428 Gm37641-201ENSMUST00000193837 239 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 119.3 ms