Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.5□□□□□ -1.69
Msx1P13297 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Msx1P13297 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Msx1P13297 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.5□□□□□ -1.69
Msx1P13297 Gm23014-201ENSMUST00000104144 130 ntBASIC4.5□□□□□ -1.69
Msx1P13297 Gm15714-201ENSMUST00000117168 250 ntBASIC4.5□□□□□ -1.69
Msx1P13297 Gm14500-201ENSMUST00000121647 113 ntBASIC4.5□□□□□ -1.69
Msx1P13297 Gm14629-201ENSMUST00000122428 144 ntBASIC4.5□□□□□ -1.69
Msx1P13297 Gm8840-201ENSMUST00000122454 386 ntBASIC4.5□□□□□ -1.69
Msx1P13297 Gm26482-201ENSMUST00000158015 62 ntBASIC4.5□□□□□ -1.69
Msx1P13297 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Msx1P13297 Gm5010-201ENSMUST00000213131 260 ntBASIC4.5□□□□□ -1.69
Msx1P13297 Gm24929-201ENSMUST00000083403 139 ntBASIC4.5□□□□□ -1.69
Msx1P13297 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Msx1P13297 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.5□□□□□ -1.69
Msx1P13297 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Msx1P13297 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
Msx1P13297 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Msx1P13297 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Msx1P13297 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Msx1P13297 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Msx1P13297 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Msx1P13297 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Msx1P13297 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Msx1P13297 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Msx1P13297 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC4.49□□□□□ -1.69
Msx1P13297 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.49□□□□□ -1.69
Msx1P13297 Gm22845-201ENSMUST00000157712 104 ntBASIC4.49□□□□□ -1.69
Msx1P13297 Gm25267-201ENSMUST00000158522 63 ntBASIC4.49□□□□□ -1.69
Msx1P13297 Gm28660-201ENSMUST00000186496 253 ntBASIC4.49□□□□□ -1.69
Msx1P13297 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Msx1P13297 Snord22-201ENSMUST00000083153 126 ntBASIC4.49□□□□□ -1.69
Msx1P13297 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.49□□□□□ -1.69
Msx1P13297 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Msx1P13297 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Msx1P13297 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Msx1P13297 AC153964.2-201ENSMUST00000217704 2474 ntBASIC4.49□□□□□ -1.69
Msx1P13297 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.49□□□□□ -1.69
Msx1P13297 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Msx1P13297 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Msx1P13297 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Msx1P13297 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Msx1P13297 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Msx1P13297 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.48□□□□□ -1.69
Msx1P13297 Gm13787-201ENSMUST00000120422 168 ntBASIC4.48□□□□□ -1.69
Msx1P13297 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.48□□□□□ -1.69
Msx1P13297 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.48□□□□□ -1.69
Msx1P13297 Gm3145-201ENSMUST00000188584 220 ntBASIC4.48□□□□□ -1.69
Msx1P13297 Gm29167-201ENSMUST00000190024 377 ntBASIC4.48□□□□□ -1.69
Msx1P13297 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.48□□□□□ -1.69
Msx1P13297 Gm44352-201ENSMUST00000196358 110 ntBASIC4.48□□□□□ -1.69
Msx1P13297 Gm44425-201ENSMUST00000203739 429 ntBASIC4.48□□□□□ -1.69
Msx1P13297 AC154262.1-201ENSMUST00000225976 286 ntBASIC4.48□□□□□ -1.69
Msx1P13297 Gm23847-201ENSMUST00000083829 110 ntBASIC4.48□□□□□ -1.69
Msx1P13297 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Msx1P13297 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Msx1P13297 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Msx1P13297 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Msx1P13297 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Msx1P13297 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Msx1P13297 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Msx1P13297 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Msx1P13297 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Msx1P13297 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Msx1P13297 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Msx1P13297 Gm22051-201ENSMUST00000117002 127 ntBASIC4.47□□□□□ -1.69
Msx1P13297 Gm12143-201ENSMUST00000119666 332 ntBASIC4.47□□□□□ -1.69
Msx1P13297 Gm13867-201ENSMUST00000120844 395 ntBASIC4.47□□□□□ -1.69
Msx1P13297 Gm13132-201ENSMUST00000121194 472 ntBASIC4.47□□□□□ -1.69
Msx1P13297 Gm23434-201ENSMUST00000157179 100 ntBASIC4.47□□□□□ -1.69
Msx1P13297 Gm22075-201ENSMUST00000158599 192 ntBASIC4.47□□□□□ -1.69
Msx1P13297 Mir6344-201ENSMUST00000183462 104 ntBASIC4.47□□□□□ -1.69
Msx1P13297 Mir7022-201ENSMUST00000183749 61 ntBASIC4.47□□□□□ -1.69
Msx1P13297 Gm44402-201ENSMUST00000203677 238 ntBASIC4.47□□□□□ -1.69
Msx1P13297 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.47□□□□□ -1.69
Msx1P13297 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Msx1P13297 Mecom-201ENSMUST00000061088 348 ntBASIC4.47□□□□□ -1.69
Msx1P13297 mt-Tt-201ENSMUST00000082422 67 ntBASIC4.47□□□□□ -1.69
Msx1P13297 Snord14d-201ENSMUST00000083424 86 ntBASIC4.47□□□□□ -1.69
Msx1P13297 Mir338-201ENSMUST00000083666 98 ntBASIC4.47□□□□□ -1.69
Msx1P13297 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Msx1P13297 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Msx1P13297 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Msx1P13297 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Msx1P13297 Gm9218-201ENSMUST00000121068 2694 ntBASIC4.47□□□□□ -1.69
Msx1P13297 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Msx1P13297 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
Msx1P13297 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Msx1P13297 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Msx1P13297 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Msx1P13297 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Msx1P13297 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.46□□□□□ -1.7
Msx1P13297 Mir761-201ENSMUST00000103245 76 ntBASIC4.46□□□□□ -1.7
Msx1P13297 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Msx1P13297 Gm23594-201ENSMUST00000104307 134 ntBASIC4.46□□□□□ -1.7
Msx1P13297 Gm22204-201ENSMUST00000122654 327 ntBASIC4.46□□□□□ -1.7
Msx1P13297 Gm5963-201ENSMUST00000143451 236 ntBASIC4.46□□□□□ -1.7
Msx1P13297 Gm25606-201ENSMUST00000158363 95 ntBASIC4.46□□□□□ -1.7
Msx1P13297 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Msx1P13297 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms