Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.72□□□□□ -1.81
Hoxd3P09027 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm22676-201ENSMUST00000116972 129 ntBASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm7840-201ENSMUST00000122086 533 ntBASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm14629-201ENSMUST00000122428 144 ntBASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm24944-201ENSMUST00000158330 128 ntBASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm22943-201ENSMUST00000158564 76 ntBASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm25364-201ENSMUST00000158851 107 ntBASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm22070-201ENSMUST00000178475 107 ntBASIC3.72□□□□□ -1.81
Hoxd3P09027 Mir6963-201ENSMUST00000183535 71 ntBASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm23925-202ENSMUST00000188429 132 ntBASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm44320-201ENSMUST00000199276 86 ntBASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm19096-201ENSMUST00000209705 766 ntBASIC3.72□□□□□ -1.81
Hoxd3P09027 AC156798.1-201ENSMUST00000220508 224 ntBASIC3.72□□□□□ -1.81
Hoxd3P09027 AC158955.1-201ENSMUST00000227140 385 ntBASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm24030-201ENSMUST00000083931 164 ntBASIC3.72□□□□□ -1.81
Hoxd3P09027 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Hoxd3P09027 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Hoxd3P09027 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Hoxd3P09027 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Hoxd3P09027 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Hoxd3P09027 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm38101-201ENSMUST00000193484 3557 ntBASIC3.72□□□□□ -1.81
Hoxd3P09027 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Hoxd3P09027 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Hoxd3P09027 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Hoxd3P09027 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Hoxd3P09027 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
Hoxd3P09027 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Hoxd3P09027 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Hoxd3P09027 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Hoxd3P09027 Gm13867-201ENSMUST00000120844 395 ntBASIC3.71□□□□□ -1.82
Hoxd3P09027 Gm24716-201ENSMUST00000157524 104 ntBASIC3.71□□□□□ -1.82
Hoxd3P09027 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Hoxd3P09027 Gm27520-201ENSMUST00000184872 81 ntBASIC3.71□□□□□ -1.82
Hoxd3P09027 Gm37545-201ENSMUST00000186512 148 ntBASIC3.71□□□□□ -1.82
Hoxd3P09027 Gm4714-201ENSMUST00000203395 279 ntBASIC3.71□□□□□ -1.82
Hoxd3P09027 Gm44932-201ENSMUST00000206799 121 ntBASIC3.71□□□□□ -1.82
Hoxd3P09027 Gm45687-201ENSMUST00000209454 155 ntBASIC3.71□□□□□ -1.82
Hoxd3P09027 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Hoxd3P09027 mt-Tt-201ENSMUST00000082422 67 ntBASIC3.71□□□□□ -1.82
Hoxd3P09027 Gm22350-201ENSMUST00000083924 156 ntBASIC3.71□□□□□ -1.82
Hoxd3P09027 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Hoxd3P09027 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Hoxd3P09027 Gm43594-201ENSMUST00000201153 3442 ntBASIC3.71□□□□□ -1.82
Hoxd3P09027 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Hoxd3P09027 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Hoxd3P09027 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.71□□□□□ -1.82
Hoxd3P09027 Gm21037-201ENSMUST00000209086 2608 ntBASIC3.71□□□□□ -1.82
Hoxd3P09027 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Hoxd3P09027 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Hoxd3P09027 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Hoxd3P09027 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC3.7□□□□□ -1.82
Hoxd3P09027 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxd3P09027 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxd3P09027 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Hoxd3P09027 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.7□□□□□ -1.82
Hoxd3P09027 Gm37696-201ENSMUST00000194223 3349 ntBASIC3.7□□□□□ -1.82
Hoxd3P09027 Gm12328-201ENSMUST00000118611 197 ntBASIC3.7□□□□□ -1.82
Hoxd3P09027 Gm16186-201ENSMUST00000120132 216 ntBASIC3.7□□□□□ -1.82
Hoxd3P09027 Gm13443-201ENSMUST00000120770 555 ntBASIC3.7□□□□□ -1.82
Hoxd3P09027 Gm25980-201ENSMUST00000157176 218 ntBASIC3.7□□□□□ -1.82
Hoxd3P09027 Gm26034-201ENSMUST00000158154 116 ntBASIC3.7□□□□□ -1.82
Hoxd3P09027 Gm25444-201ENSMUST00000158999 113 ntBASIC3.7□□□□□ -1.82
Hoxd3P09027 Mir669j-201ENSMUST00000179023 121 ntBASIC3.7□□□□□ -1.82
Hoxd3P09027 Gm23370-202ENSMUST00000197008 129 ntBASIC3.7□□□□□ -1.82
Hoxd3P09027 Gm43680-201ENSMUST00000199466 340 ntBASIC3.7□□□□□ -1.82
Hoxd3P09027 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC3.7□□□□□ -1.82
Hoxd3P09027 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.7□□□□□ -1.82
Hoxd3P09027 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.7□□□□□ -1.82
Hoxd3P09027 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxd3P09027 Gm22421-201ENSMUST00000083058 107 ntBASIC3.7□□□□□ -1.82
Hoxd3P09027 Mir466-201ENSMUST00000093591 73 ntBASIC3.7□□□□□ -1.82
Hoxd3P09027 Gm42548-201ENSMUST00000202669 3933 ntBASIC3.7□□□□□ -1.82
Hoxd3P09027 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxd3P09027 Gm45137-201ENSMUST00000208652 4415 ntBASIC3.7□□□□□ -1.82
Hoxd3P09027 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxd3P09027 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxd3P09027 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxd3P09027 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxd3P09027 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Hoxd3P09027 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxd3P09027 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.7□□□□□ -1.82
Hoxd3P09027 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Hoxd3P09027 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxd3P09027 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Hoxd3P09027 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.69□□□□□ -1.82
Hoxd3P09027 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Hoxd3P09027 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Hoxd3P09027 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Hoxd3P09027 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.69□□□□□ -1.82
Hoxd3P09027 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
Hoxd3P09027 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Hoxd3P09027 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms