Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col3a1P08121 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Col3a1P08121 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Col3a1P08121 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Col3a1P08121 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col3a1P08121 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Col3a1P08121 Mir883a-201ENSMUST00000104824 76 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm25529-201ENSMUST00000104850 92 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Col3a1P08121 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col3a1P08121 Gm23988-201ENSMUST00000117034 122 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm11890-201ENSMUST00000119585 417 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm6574-201ENSMUST00000120037 362 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm15167-201ENSMUST00000121997 187 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC3.16□□□□□ -1.9
Col3a1P08121 Gm26277-201ENSMUST00000157097 152 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm22651-201ENSMUST00000157872 94 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm22765-201ENSMUST00000158371 128 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm10105-201ENSMUST00000184601 270 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm27694-201ENSMUST00000184740 86 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm6501-201ENSMUST00000187178 916 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.16□□□□□ -1.9
Col3a1P08121 Gm38167-201ENSMUST00000195704 1178 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Igkv11-114-201ENSMUST00000200013 346 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 AC122464.1-201ENSMUST00000202789 770 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm44870-201ENSMUST00000207291 357 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm45200-201ENSMUST00000207434 919 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC3.16□□□□□ -1.9
Col3a1P08121 Gm17990-201ENSMUST00000211728 553 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm45402-201ENSMUST00000211796 223 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC3.16□□□□□ -1.9
Col3a1P08121 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Snord42a-201ENSMUST00000082606 65 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm23678-201ENSMUST00000083157 107 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm23461-201ENSMUST00000083265 107 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm23264-201ENSMUST00000083372 107 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col3a1P08121 Mir208b-201ENSMUST00000104735 77 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm13329-201ENSMUST00000117063 265 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm13082-201ENSMUST00000118877 561 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm14980-201ENSMUST00000121247 736 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.16□□□□□ -1.9
Col3a1P08121 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.16□□□□□ -1.9
Col3a1P08121 Gm22085-201ENSMUST00000158344 110 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Col3a1P08121 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.16□□□□□ -1.9
Col3a1P08121 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.16□□□□□ -1.9
Col3a1P08121 Gm28995-201ENSMUST00000186625 261 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC3.16□□□□□ -1.9
Col3a1P08121 Gm20923-201ENSMUST00000190009 319 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC3.16□□□□□ -1.9
Col3a1P08121 Gm5731-201ENSMUST00000190969 481 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.16□□□□□ -1.9
Col3a1P08121 Gm43440-201ENSMUST00000201957 729 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm29754-201ENSMUST00000206269 358 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm44853-201ENSMUST00000209070 250 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 AC158641.1-201ENSMUST00000218933 229 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.16□□□□□ -1.9
Col3a1P08121 Gm31849-201ENSMUST00000220306 375 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm18617-201ENSMUST00000222311 259 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 AC154271.1-201ENSMUST00000224780 383 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm23515-201ENSMUST00000082829 107 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm22423-201ENSMUST00000082861 184 ntBASIC3.16□□□□□ -1.9
Col3a1P08121 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC3.16□□□□□ -1.9
Col3a1P08121 Gm18360-201ENSMUST00000173327 1524 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Col3a1P08121 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC3.15□□□□□ -1.91
Col3a1P08121 Gm25088-201ENSMUST00000101803 79 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Gm22834-201ENSMUST00000102021 79 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Gm11268-201ENSMUST00000118347 267 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Gm22960-201ENSMUST00000122517 104 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Gm24836-201ENSMUST00000122609 108 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Gm25106-201ENSMUST00000122672 134 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Col3a1P08121 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.15□□□□□ -1.91
Col3a1P08121 Gm22519-201ENSMUST00000158270 178 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Gm22136-201ENSMUST00000158751 268 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Gm7925-201ENSMUST00000166690 401 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Gm25671-201ENSMUST00000178612 105 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col3a1P08121 Gm23307-201ENSMUST00000179167 105 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Gm25286-201ENSMUST00000179790 105 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Gm27161-201ENSMUST00000183960 562 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Mir6238-201ENSMUST00000184140 129 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.15□□□□□ -1.91
Col3a1P08121 Gm43723-201ENSMUST00000196886 189 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Gm45438-201ENSMUST00000210242 564 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Gm45678-201ENSMUST00000210509 295 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Gm45439-201ENSMUST00000211723 359 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.15□□□□□ -1.91
Col3a1P08121 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 AC154521.1-201ENSMUST00000222635 330 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 AF357341-201ENSMUST00000083088 75 ntBASIC3.15□□□□□ -1.91
Col3a1P08121 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col3a1P08121 Gm13510-201ENSMUST00000118659 429 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms