| Hoxa3 | P02831 | Gm23454-201 | ENSMUST00000083332 | 133 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Cd46-203 | ENSMUST00000162650 | 6288 nt | APPRIS P1 TSL 1 (best) BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Vmn1r49-203 | ENSMUST00000226368 | 6276 nt | APPRIS P1 BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Erbin-207 | ENSMUST00000191275 | 5552 nt | APPRIS P3 TSL 1 (best) BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm14696-201 | ENSMUST00000144294 | 3976 nt | TSL 1 (best) BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm42870-201 | ENSMUST00000199355 | 3470 nt | BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm15319-201 | ENSMUST00000084046 | 2522 nt | APPRIS P1 TSL 1 (best) BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | 4930467E23Rik-201 | ENSMUST00000098909 | 2514 nt | APPRIS P1 TSL 5 BASIC | 3.13 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Vmn1r89-202 | ENSMUST00000226717 | 4120 nt | APPRIS P2 BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Pramel6-202 | ENSMUST00000111572 | 1781 nt | APPRIS P1 TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Olfr136-203 | ENSMUST00000208539 | 1773 nt | APPRIS P1 TSL 3 BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm42481-201 | ENSMUST00000196822 | 2178 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm43016-201 | ENSMUST00000196628 | 3150 nt | TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | 4932431L22Rik-201 | ENSMUST00000193456 | 3140 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm25764-201 | ENSMUST00000104092 | 134 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm11935-201 | ENSMUST00000118608 | 399 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm14298-201 | ENSMUST00000139032 | 237 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm11816-201 | ENSMUST00000142744 | 353 nt | TSL 3 BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm16356-201 | ENSMUST00000143300 | 169 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | A630050E04Rik-201 | ENSMUST00000151443 | 581 nt | TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm22598-201 | ENSMUST00000157600 | 127 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm24930-201 | ENSMUST00000158315 | 83 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm22114-201 | ENSMUST00000177756 | 107 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm26426-201 | ENSMUST00000177866 | 123 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm26060-201 | ENSMUST00000180094 | 123 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm7656-201 | ENSMUST00000182468 | 1004 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm43814-201 | ENSMUST00000197851 | 413 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm44844-201 | ENSMUST00000207242 | 336 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Olfr1041-ps1-201 | ENSMUST00000215884 | 271 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm30624-201 | ENSMUST00000220039 | 628 nt | TSL 3 BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Snora23-201 | ENSMUST00000082517 | 184 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm23451-201 | ENSMUST00000083328 | 122 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gpr174-203 | ENSMUST00000118820 | 5112 nt | APPRIS P1 TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Btbd35f3-201 | ENSMUST00000140300 | 1943 nt | APPRIS P1 BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm45884-201 | ENSMUST00000209540 | 3416 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | F8-201 | ENSMUST00000033539 | 9784 nt | APPRIS P3 TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Cyp3a59-201 | ENSMUST00000035571 | 1990 nt | APPRIS P1 TSL 1 (best) BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm3239-201 | ENSMUST00000163525 | 1751 nt | APPRIS P5 TSL 5 BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Vmn1r30-205 | ENSMUST00000228635 | 1776 nt | APPRIS P1 BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | AC154634.4-201 | ENSMUST00000226077 | 2665 nt | BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Olfr735-202 | ENSMUST00000216634 | 3860 nt | APPRIS ALT2 TSL 3 BASIC | 3.12 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Cntn6-202 | ENSMUST00000161070 | 3515 nt | TSL 5 BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Olfr1104-202 | ENSMUST00000214857 | 2693 nt | APPRIS P1 TSL 5 BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm44049-201 | ENSMUST00000204905 | 2984 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Olfr873-205 | ENSMUST00000215540 | 3784 nt | APPRIS ALT2 TSL 5 BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Catsper4-202 | ENSMUST00000105878 | 632 nt | TSL 1 (best) BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm6071-201 | ENSMUST00000119561 | 440 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm13692-201 | ENSMUST00000120774 | 371 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm14551-201 | ENSMUST00000120802 | 256 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm12876-201 | ENSMUST00000120975 | 408 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm22957-201 | ENSMUST00000122511 | 123 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm26275-201 | ENSMUST00000157101 | 268 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm24481-201 | ENSMUST00000157210 | 102 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm22225-201 | ENSMUST00000157358 | 278 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm25054-201 | ENSMUST00000157370 | 97 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm22516-201 | ENSMUST00000158266 | 124 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm22840-201 | ENSMUST00000158444 | 136 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm17186-201 | ENSMUST00000171742 | 456 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm23053-201 | ENSMUST00000175136 | 96 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Fam107b-206 | ENSMUST00000176254 | 300 nt | TSL 5 BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm26585-201 | ENSMUST00000180890 | 630 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm19620-201 | ENSMUST00000195972 | 434 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm44941-201 | ENSMUST00000204216 | 627 nt | TSL 2 BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm19177-201 | ENSMUST00000204520 | 613 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm45313-201 | ENSMUST00000210584 | 178 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm5358-201 | ENSMUST00000212814 | 353 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm35732-201 | ENSMUST00000221737 | 356 nt | TSL 3 BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | AC157352.1-201 | ENSMUST00000222762 | 303 nt | TSL 5 BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | AC154576.2-202 | ENSMUST00000223916 | 688 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | AC124581.4-201 | ENSMUST00000225874 | 463 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | AC155167.3-201 | ENSMUST00000226349 | 217 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Rps15a-ps1-201 | ENSMUST00000071120 | 393 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm23736-201 | ENSMUST00000082553 | 75 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm24626-201 | ENSMUST00000082621 | 161 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Snora7a-201 | ENSMUST00000082629 | 140 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm36989-201 | ENSMUST00000193225 | 2160 nt | BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Vmn1r185-207 | ENSMUST00000227695 | 5292 nt | APPRIS P1 BASIC | 3.11 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Rab27b-203 | ENSMUST00000121693 | 6891 nt | APPRIS P1 TSL 1 (best) BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Olfr1009-203 | ENSMUST00000216443 | 4047 nt | APPRIS P1 TSL 5 BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Arhgap5-202 | ENSMUST00000217820 | 2332 nt | TSL 5 BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Vmn1r66-205 | ENSMUST00000228622 | 3304 nt | APPRIS P1 BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm37176-201 | ENSMUST00000193300 | 4051 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm25727-201 | ENSMUST00000104522 | 131 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | n-R5s52-201 | ENSMUST00000104614 | 113 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Defa-ps5-201 | ENSMUST00000121541 | 279 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm12693-201 | ENSMUST00000121965 | 483 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm13725-201 | ENSMUST00000122139 | 207 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm14100-201 | ENSMUST00000125575 | 651 nt | TSL 3 BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Pfdn4-205 | ENSMUST00000136839 | 452 nt | TSL 1 (best) BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm22320-201 | ENSMUST00000157149 | 312 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm22792-201 | ENSMUST00000157225 | 133 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm22219-201 | ENSMUST00000157562 | 319 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm24858-201 | ENSMUST00000158058 | 323 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm25902-201 | ENSMUST00000158493 | 318 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm23704-201 | ENSMUST00000158844 | 340 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm17065-201 | ENSMUST00000165245 | 239 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Vmn2r-ps65-201 | ENSMUST00000173309 | 220 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm26979-201 | ENSMUST00000182971 | 217 nt | TSL 3 BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm7329-201 | ENSMUST00000185915 | 210 nt | BASIC | 3.1 | □□□□□ -1.91 | | |
| Hoxa3 | P02831 | Gm28288-201 | ENSMUST00000191019 | 214 nt | BASIC | 3.1 | □□□□□ -1.91 | | |