Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm24439-201ENSMUST00000157894 117 ntBASIC2.55□□□□□ -2
ClppO88696 Gm23068-201ENSMUST00000158239 293 ntBASIC2.55□□□□□ -2
ClppO88696 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.55□□□□□ -2
ClppO88696 Gm15900-201ENSMUST00000161584 342 ntBASIC2.55□□□□□ -2
ClppO88696 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
ClppO88696 Gm20660-201ENSMUST00000177515 289 ntBASIC2.55□□□□□ -2
ClppO88696 Gm27786-201ENSMUST00000184337 70 ntBASIC2.55□□□□□ -2
ClppO88696 Gm21673-201ENSMUST00000186640 436 ntBASIC2.55□□□□□ -2
ClppO88696 Gm21135-201ENSMUST00000189023 436 ntBASIC2.55□□□□□ -2
ClppO88696 Gm7871-201ENSMUST00000195346 618 ntBASIC2.55□□□□□ -2
ClppO88696 Gm43582-201ENSMUST00000196149 343 ntBASIC2.55□□□□□ -2
ClppO88696 Gm42164-201ENSMUST00000198881 379 ntBASIC2.55□□□□□ -2
ClppO88696 Gm43600-201ENSMUST00000202134 223 ntBASIC2.55□□□□□ -2
ClppO88696 Gm44472-201ENSMUST00000204922 943 ntBASIC2.55□□□□□ -2
ClppO88696 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.55□□□□□ -2
ClppO88696 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
ClppO88696 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.55□□□□□ -2
ClppO88696 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.55□□□□□ -2
ClppO88696 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.55□□□□□ -2
ClppO88696 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
ClppO88696 Gm23723-201ENSMUST00000082996 132 ntBASIC2.55□□□□□ -2
ClppO88696 Mir137-201ENSMUST00000083635 73 ntBASIC2.55□□□□□ -2
ClppO88696 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.55□□□□□ -2
ClppO88696 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.54□□□□□ -2
ClppO88696 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.54□□□□□ -2
ClppO88696 Gm17132-201ENSMUST00000109542 1158 ntBASIC2.54□□□□□ -2
ClppO88696 Gm13806-201ENSMUST00000117822 325 ntBASIC2.54□□□□□ -2
ClppO88696 Gm11460-201ENSMUST00000118200 361 ntBASIC2.54□□□□□ -2
ClppO88696 Gm14417-201ENSMUST00000120036 1074 ntBASIC2.54□□□□□ -2
ClppO88696 Gm14785-201ENSMUST00000120185 539 ntBASIC2.54□□□□□ -2
ClppO88696 Gm6568-201ENSMUST00000122274 697 ntBASIC2.54□□□□□ -2
ClppO88696 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.54□□□□□ -2
ClppO88696 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.54□□□□□ -2
ClppO88696 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ClppO88696 Gm23588-201ENSMUST00000157659 99 ntBASIC2.54□□□□□ -2
ClppO88696 Gm22330-201ENSMUST00000158068 115 ntBASIC2.54□□□□□ -2
ClppO88696 Gm22611-201ENSMUST00000158288 150 ntBASIC2.54□□□□□ -2
ClppO88696 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.54□□□□□ -2
ClppO88696 Mir3103-201ENSMUST00000175474 67 ntBASIC2.54□□□□□ -2
ClppO88696 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.54□□□□□ -2
ClppO88696 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.54□□□□□ -2
ClppO88696 Gm27245-201ENSMUST00000184385 376 ntBASIC2.54□□□□□ -2
ClppO88696 Mir7050-201ENSMUST00000184636 60 ntBASIC2.54□□□□□ -2
ClppO88696 Trbv24-201ENSMUST00000194614 347 ntBASIC2.54□□□□□ -2
ClppO88696 Gm37029-201ENSMUST00000195773 239 ntBASIC2.54□□□□□ -2
ClppO88696 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.54□□□□□ -2
ClppO88696 Gm19252-201ENSMUST00000204705 305 ntBASIC2.54□□□□□ -2
ClppO88696 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.54□□□□□ -2
ClppO88696 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.54□□□□□ -2
ClppO88696 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.54□□□□□ -2
ClppO88696 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.54□□□□□ -2
ClppO88696 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.54□□□□□ -2
ClppO88696 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.54□□□□□ -2
ClppO88696 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.54□□□□□ -2
ClppO88696 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.54□□□□□ -2
ClppO88696 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.54□□□□□ -2
ClppO88696 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.54□□□□□ -2
ClppO88696 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
ClppO88696 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
ClppO88696 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.53□□□□□ -2
ClppO88696 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.53□□□□□ -2
ClppO88696 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.53□□□□□ -2
ClppO88696 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.53□□□□□ -2
ClppO88696 Mir466k-201ENSMUST00000116774 122 ntBASIC2.53□□□□□ -2
ClppO88696 Gm11845-201ENSMUST00000117886 327 ntBASIC2.53□□□□□ -2
ClppO88696 Gm11849-201ENSMUST00000121293 261 ntBASIC2.53□□□□□ -2
ClppO88696 Gm9225-201ENSMUST00000121921 836 ntBASIC2.53□□□□□ -2
ClppO88696 Gm12071-201ENSMUST00000121968 469 ntBASIC2.53□□□□□ -2
ClppO88696 Gm23867-201ENSMUST00000122649 274 ntBASIC2.53□□□□□ -2
ClppO88696 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
ClppO88696 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.53□□□□□ -2
ClppO88696 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.53□□□□□ -2
ClppO88696 Gm6615-201ENSMUST00000199426 631 ntBASIC2.53□□□□□ -2
ClppO88696 Gm44923-201ENSMUST00000206673 85 ntBASIC2.53□□□□□ -2
ClppO88696 Gm45366-201ENSMUST00000209828 384 ntBASIC2.53□□□□□ -2
ClppO88696 AC134334.1-201ENSMUST00000214277 255 ntBASIC2.53□□□□□ -2
ClppO88696 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.53□□□□□ -2
ClppO88696 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.53□□□□□ -2
ClppO88696 AC120553.1-201ENSMUST00000227313 260 ntBASIC2.53□□□□□ -2
ClppO88696 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.53□□□□□ -2
ClppO88696 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.53□□□□□ -2
ClppO88696 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.53□□□□□ -2
ClppO88696 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
ClppO88696 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
ClppO88696 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
ClppO88696 Gm26147-201ENSMUST00000104479 114 ntBASIC2.52□□□□□ -2.01
ClppO88696 Gm26247-201ENSMUST00000116702 91 ntBASIC2.52□□□□□ -2.01
ClppO88696 Gm12878-201ENSMUST00000118744 332 ntBASIC2.52□□□□□ -2.01
ClppO88696 Gm15266-201ENSMUST00000119635 255 ntBASIC2.52□□□□□ -2.01
ClppO88696 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.52□□□□□ -2.01
ClppO88696 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC2.52□□□□□ -2.01
ClppO88696 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.52□□□□□ -2.01
ClppO88696 Gm23980-201ENSMUST00000157135 158 ntBASIC2.52□□□□□ -2.01
ClppO88696 Gm24780-201ENSMUST00000157635 143 ntBASIC2.52□□□□□ -2.01
ClppO88696 Mir3075-201ENSMUST00000175340 85 ntBASIC2.52□□□□□ -2.01
ClppO88696 Mir3076-201ENSMUST00000175415 60 ntBASIC2.52□□□□□ -2.01
ClppO88696 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.52□□□□□ -2.01
ClppO88696 Gm19193-201ENSMUST00000190263 590 ntBASIC2.52□□□□□ -2.01
ClppO88696 Gm44818-201ENSMUST00000206608 358 ntBASIC2.52□□□□□ -2.01
ClppO88696 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms