Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm22247-201ENSMUST00000082476 131 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 Gm25632-201ENSMUST00000083112 85 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 Mir151-201ENSMUST00000083678 68 ntBASIC1.31□□□□□ -2.2
Hmgb3O54879 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Hmgb3O54879 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Hmgb3O54879 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Hmgb3O54879 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Hmgb3O54879 Gm15526-201ENSMUST00000112504 204 ntBASIC1.3□□□□□ -2.2
Hmgb3O54879 Gm24895-201ENSMUST00000122742 74 ntBASIC1.3□□□□□ -2.2
Hmgb3O54879 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC1.3□□□□□ -2.2
Hmgb3O54879 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC1.3□□□□□ -2.2
Hmgb3O54879 Gm22098-201ENSMUST00000157930 85 ntBASIC1.3□□□□□ -2.2
Hmgb3O54879 Gm25711-201ENSMUST00000158633 128 ntBASIC1.3□□□□□ -2.2
Hmgb3O54879 Gm16162-201ENSMUST00000162296 297 ntBASIC1.3□□□□□ -2.2
Hmgb3O54879 Gm17038-201ENSMUST00000166586 494 ntBASIC1.3□□□□□ -2.2
Hmgb3O54879 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC1.3□□□□□ -2.2
Hmgb3O54879 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Hmgb3O54879 Gm11395-201ENSMUST00000181011 499 ntBASIC1.3□□□□□ -2.2
Hmgb3O54879 Gm27715-201ENSMUST00000184714 260 ntBASIC1.3□□□□□ -2.2
Hmgb3O54879 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Hmgb3O54879 Gm5329-201ENSMUST00000186898 463 ntBASIC1.3□□□□□ -2.2
Hmgb3O54879 Gm43228-201ENSMUST00000200735 264 ntBASIC1.3□□□□□ -2.2
Hmgb3O54879 Gm44181-201ENSMUST00000203106 483 ntBASIC1.3□□□□□ -2.2
Hmgb3O54879 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC1.3□□□□□ -2.2
Hmgb3O54879 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.3□□□□□ -2.2
Hmgb3O54879 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Hmgb3O54879 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.3□□□□□ -2.2
Hmgb3O54879 Gm42736-201ENSMUST00000200723 1353 ntBASIC1.3□□□□□ -2.2
Hmgb3O54879 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Hmgb3O54879 Gm23551-201ENSMUST00000116852 121 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 Gm13355-201ENSMUST00000117996 317 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 Gm15183-201ENSMUST00000118933 348 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 Gm12881-201ENSMUST00000121191 203 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 Gm23172-201ENSMUST00000157160 124 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 Mir1949-201ENSMUST00000157434 141 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 Gm7592-201ENSMUST00000160674 627 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
Hmgb3O54879 Gm28453-203ENSMUST00000187041 189 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 Gm29429-201ENSMUST00000187071 121 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 Gm43402-201ENSMUST00000197159 159 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 Gm44656-201ENSMUST00000208428 490 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.29□□□□□ -2.2
Hmgb3O54879 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 AC192088.2-201ENSMUST00000227590 411 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Hmgb3O54879 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 Gm27013-202ENSMUST00000205067 1436 ntBASIC1.29□□□□□ -2.2
Hmgb3O54879 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm11785-201ENSMUST00000120165 601 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm14360-201ENSMUST00000120670 393 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC1.28□□□□□ -2.2
Hmgb3O54879 Trav20-201ENSMUST00000142754 347 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
Hmgb3O54879 Snord11-201ENSMUST00000158468 84 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm23181-201ENSMUST00000158685 110 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm22665-201ENSMUST00000158720 275 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm22527-201ENSMUST00000158816 106 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm20415-201ENSMUST00000172877 423 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm28383-201ENSMUST00000187563 139 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm29262-201ENSMUST00000190084 196 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm42976-201ENSMUST00000200313 222 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm44024-201ENSMUST00000203008 476 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm43894-201ENSMUST00000203274 688 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm45071-201ENSMUST00000205353 571 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm45116-201ENSMUST00000207392 275 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm2446-201ENSMUST00000220144 772 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Hmgb3O54879 AC158388.1-201ENSMUST00000225441 256 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 AC137902.2-201ENSMUST00000227989 576 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.28□□□□□ -2.2
Hmgb3O54879 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Hmgb3O54879 Gm26126-201ENSMUST00000083188 164 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.28□□□□□ -2.2
Hmgb3O54879 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.28□□□□□ -2.2
Hmgb3O54879 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.28□□□□□ -2.2
Hmgb3O54879 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Hmgb3O54879 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.28□□□□□ -2.21
Hmgb3O54879 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Hmgb3O54879 Gm26077-201ENSMUST00000104064 123 ntBASIC1.27□□□□□ -2.21
Hmgb3O54879 Gm22488-201ENSMUST00000116811 127 ntBASIC1.27□□□□□ -2.21
Hmgb3O54879 Gm14674-201ENSMUST00000117816 342 ntBASIC1.27□□□□□ -2.21
Hmgb3O54879 Gm6923-201ENSMUST00000118343 406 ntBASIC1.27□□□□□ -2.21
Hmgb3O54879 Gm12550-201ENSMUST00000118478 329 ntBASIC1.27□□□□□ -2.21
Hmgb3O54879 Gm12935-201ENSMUST00000119352 246 ntBASIC1.27□□□□□ -2.21
Hmgb3O54879 Gm12105-201ENSMUST00000120846 779 ntBASIC1.27□□□□□ -2.21
Hmgb3O54879 Gm14600-201ENSMUST00000121032 630 ntBASIC1.27□□□□□ -2.21
Hmgb3O54879 Gm15536-201ENSMUST00000121411 114 ntBASIC1.27□□□□□ -2.21
Hmgb3O54879 Gm22718-201ENSMUST00000122701 315 ntBASIC1.27□□□□□ -2.21
Hmgb3O54879 Gm26214-201ENSMUST00000158581 107 ntBASIC1.27□□□□□ -2.21
Hmgb3O54879 Gm24174-201ENSMUST00000158933 111 ntBASIC1.27□□□□□ -2.21
Hmgb3O54879 Gm4468-201ENSMUST00000170206 294 ntBASIC1.27□□□□□ -2.21
Hmgb3O54879 Gm28000-201ENSMUST00000184380 85 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms