Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm23687-201ENSMUST00000178664 79 ntBASIC1.43□□□□□ -2.18
Sdc4O35988 Gm24566-201ENSMUST00000179286 79 ntBASIC1.43□□□□□ -2.18
Sdc4O35988 Gm23305-201ENSMUST00000179342 79 ntBASIC1.43□□□□□ -2.18
Sdc4O35988 Gm26389-201ENSMUST00000179819 79 ntBASIC1.43□□□□□ -2.18
Sdc4O35988 Gm22130-201ENSMUST00000179979 79 ntBASIC1.43□□□□□ -2.18
Sdc4O35988 Gm22393-201ENSMUST00000180153 79 ntBASIC1.43□□□□□ -2.18
Sdc4O35988 Gm25085-201ENSMUST00000180298 79 ntBASIC1.43□□□□□ -2.18
Sdc4O35988 Gm29263-201ENSMUST00000188718 463 ntBASIC1.43□□□□□ -2.18
Sdc4O35988 Gm28384-201ENSMUST00000189079 463 ntBASIC1.43□□□□□ -2.18
Sdc4O35988 AC154296.1-201ENSMUST00000198150 67 ntBASIC1.43□□□□□ -2.18
Sdc4O35988 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.43□□□□□ -2.18
Sdc4O35988 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.43□□□□□ -2.18
Sdc4O35988 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Sdc4O35988 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Sdc4O35988 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.42□□□□□ -2.18
Sdc4O35988 Gm13602-201ENSMUST00000122405 493 ntBASIC1.42□□□□□ -2.18
Sdc4O35988 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.42□□□□□ -2.18
Sdc4O35988 Gm16354-201ENSMUST00000155376 150 ntBASIC1.42□□□□□ -2.18
Sdc4O35988 Gm23221-201ENSMUST00000158118 93 ntBASIC1.42□□□□□ -2.18
Sdc4O35988 Gm17113-201ENSMUST00000170118 171 ntBASIC1.42□□□□□ -2.18
Sdc4O35988 Gm24086-201ENSMUST00000175171 98 ntBASIC1.42□□□□□ -2.18
Sdc4O35988 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Sdc4O35988 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
Sdc4O35988 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Sdc4O35988 Gm27722-201ENSMUST00000183908 76 ntBASIC1.42□□□□□ -2.18
Sdc4O35988 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Sdc4O35988 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC1.42□□□□□ -2.18
Sdc4O35988 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
Sdc4O35988 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
Sdc4O35988 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
Sdc4O35988 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
Sdc4O35988 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
Sdc4O35988 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.41□□□□□ -2.18
Sdc4O35988 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Sdc4O35988 Gm649-201ENSMUST00000117284 1054 ntBASIC1.41□□□□□ -2.18
Sdc4O35988 Gm13355-201ENSMUST00000117996 317 ntBASIC1.41□□□□□ -2.18
Sdc4O35988 Gm11490-201ENSMUST00000118128 272 ntBASIC1.41□□□□□ -2.18
Sdc4O35988 Gm13510-201ENSMUST00000118659 429 ntBASIC1.41□□□□□ -2.18
Sdc4O35988 Gm14731-201ENSMUST00000119216 376 ntBASIC1.41□□□□□ -2.18
Sdc4O35988 Snrpert-201ENSMUST00000121967 279 ntBASIC1.41□□□□□ -2.18
Sdc4O35988 Gm14402-201ENSMUST00000122217 508 ntBASIC1.41□□□□□ -2.18
Sdc4O35988 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Sdc4O35988 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.41□□□□□ -2.18
Sdc4O35988 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Sdc4O35988 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC1.41□□□□□ -2.18
Sdc4O35988 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.41□□□□□ -2.18
Sdc4O35988 AC069561.3-201ENSMUST00000217321 114 ntBASIC1.41□□□□□ -2.18
Sdc4O35988 AC152979.4-201ENSMUST00000219893 379 ntBASIC1.41□□□□□ -2.18
Sdc4O35988 CT009764.1-201ENSMUST00000222260 483 ntBASIC1.41□□□□□ -2.18
Sdc4O35988 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.41□□□□□ -2.18
Sdc4O35988 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.41□□□□□ -2.18
Sdc4O35988 Gm10038-201ENSMUST00000077233 441 ntBASIC1.41□□□□□ -2.18
Sdc4O35988 Gm23628-201ENSMUST00000082464 173 ntBASIC1.41□□□□□ -2.18
Sdc4O35988 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Sdc4O35988 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Sdc4O35988 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Sdc4O35988 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Sdc4O35988 Gm25992-201ENSMUST00000102437 109 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 Gm14868-201ENSMUST00000117840 216 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 Mup-ps14-201ENSMUST00000118437 532 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.4□□□□□ -2.19
Sdc4O35988 Mup-ps2-201ENSMUST00000142602 533 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 Gm26004-201ENSMUST00000158804 116 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.4□□□□□ -2.19
Sdc4O35988 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.4□□□□□ -2.19
Sdc4O35988 Gm20058-201ENSMUST00000186939 284 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.4□□□□□ -2.19
Sdc4O35988 Gm29389-201ENSMUST00000191562 352 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.4□□□□□ -2.19
Sdc4O35988 Gm37002-201ENSMUST00000194560 373 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 Gm7871-201ENSMUST00000195346 618 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.4□□□□□ -2.19
Sdc4O35988 Gm43708-201ENSMUST00000198857 961 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC1.4□□□□□ -2.19
Sdc4O35988 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 Gm18268-201ENSMUST00000208445 943 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 Gm18991-201ENSMUST00000209225 746 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 Gm9068-201ENSMUST00000217393 455 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 Gm18039-201ENSMUST00000217816 728 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 Gm31849-201ENSMUST00000220306 375 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 Gm46993-201ENSMUST00000220708 259 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 AC133076.1-201ENSMUST00000228074 484 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Sdc4O35988 Gm26206-201ENSMUST00000082908 110 ntBASIC1.4□□□□□ -2.19
Sdc4O35988 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Sdc4O35988 Gm13454-201ENSMUST00000118166 483 ntBASIC1.39□□□□□ -2.19
Sdc4O35988 Gm14945-201ENSMUST00000119556 1118 ntBASIC1.39□□□□□ -2.19
Sdc4O35988 Gm16359-201ENSMUST00000124511 289 ntBASIC1.39□□□□□ -2.19
Sdc4O35988 Gm25666-201ENSMUST00000157702 107 ntBASIC1.39□□□□□ -2.19
Sdc4O35988 Mir5129-201ENSMUST00000174938 78 ntBASIC1.39□□□□□ -2.19
Sdc4O35988 Mir3098-201ENSMUST00000175416 87 ntBASIC1.39□□□□□ -2.19
Sdc4O35988 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Sdc4O35988 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Sdc4O35988 Gm23714-201ENSMUST00000179259 105 ntBASIC1.39□□□□□ -2.19
Sdc4O35988 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Sdc4O35988 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC1.39□□□□□ -2.19
Sdc4O35988 Mir6338-201ENSMUST00000183389 109 ntBASIC1.39□□□□□ -2.19
Sdc4O35988 Mir7665-201ENSMUST00000184907 63 ntBASIC1.39□□□□□ -2.19
Sdc4O35988 Gm29603-201ENSMUST00000186792 334 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms