Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC1.17□□□□□ -2.22
Ccdc180J3QNE4 Gm23180-201ENSMUST00000158686 125 ntBASIC1.17□□□□□ -2.22
Ccdc180J3QNE4 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.17□□□□□ -2.22
Ccdc180J3QNE4 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.17□□□□□ -2.22
Ccdc180J3QNE4 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.17□□□□□ -2.22
Ccdc180J3QNE4 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.17□□□□□ -2.22
Ccdc180J3QNE4 Gm20118-201ENSMUST00000187207 162 ntBASIC1.17□□□□□ -2.22
Ccdc180J3QNE4 Gm18691-201ENSMUST00000203593 872 ntBASIC1.17□□□□□ -2.22
Ccdc180J3QNE4 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC1.17□□□□□ -2.22
Ccdc180J3QNE4 Gm24319-201ENSMUST00000083389 107 ntBASIC1.17□□□□□ -2.22
Ccdc180J3QNE4 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.17□□□□□ -2.22
Ccdc180J3QNE4 Gm15110-201ENSMUST00000117545 881 ntBASIC1.16□□□□□ -2.22
Ccdc180J3QNE4 Gm15113-201ENSMUST00000119280 836 ntBASIC1.16□□□□□ -2.22
Ccdc180J3QNE4 Gm26178-201ENSMUST00000177706 107 ntBASIC1.16□□□□□ -2.22
Ccdc180J3QNE4 Gm23151-201ENSMUST00000178061 107 ntBASIC1.16□□□□□ -2.22
Ccdc180J3QNE4 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.16□□□□□ -2.22
Ccdc180J3QNE4 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Ccdc180J3QNE4 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Ccdc180J3QNE4 Mir223-201ENSMUST00000102112 110 ntBASIC1.16□□□□□ -2.22
Ccdc180J3QNE4 Gm38044-201ENSMUST00000192964 487 ntBASIC1.16□□□□□ -2.22
Ccdc180J3QNE4 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC1.16□□□□□ -2.22
Ccdc180J3QNE4 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Ccdc180J3QNE4 Gm24431-201ENSMUST00000104073 66 ntBASIC1.15□□□□□ -2.23
Ccdc180J3QNE4 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC1.15□□□□□ -2.23
Ccdc180J3QNE4 Gm38274-201ENSMUST00000195689 148 ntBASIC1.15□□□□□ -2.23
Ccdc180J3QNE4 Gm16331-201ENSMUST00000144274 498 ntBASIC1.14□□□□□ -2.23
Ccdc180J3QNE4 Gm23278-201ENSMUST00000157911 143 ntBASIC1.14□□□□□ -2.23
Ccdc180J3QNE4 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC1.14□□□□□ -2.23
Ccdc180J3QNE4 Gm19237-201ENSMUST00000205036 1132 ntBASIC1.14□□□□□ -2.23
Ccdc180J3QNE4 Gm19599-201ENSMUST00000218898 358 ntBASIC1.14□□□□□ -2.23
Ccdc180J3QNE4 Gm24555-201ENSMUST00000104548 124 ntBASIC1.13□□□□□ -2.23
Ccdc180J3QNE4 Gm24772-201ENSMUST00000158507 110 ntBASIC1.13□□□□□ -2.23
Ccdc180J3QNE4 Gm18854-201ENSMUST00000211196 329 ntBASIC1.13□□□□□ -2.23
Ccdc180J3QNE4 Gm44332-201ENSMUST00000203712 433 ntBASIC1.13□□□□□ -2.23
Ccdc180J3QNE4 Gm8219-201ENSMUST00000218309 242 ntBASIC1.13□□□□□ -2.23
Ccdc180J3QNE4 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.13□□□□□ -2.23
Ccdc180J3QNE4 Gm15215-201ENSMUST00000117773 489 ntBASIC1.12□□□□□ -2.23
Ccdc180J3QNE4 Gm6985-201ENSMUST00000121255 271 ntBASIC1.12□□□□□ -2.23
Ccdc180J3QNE4 Gm4916-201ENSMUST00000126139 642 ntBASIC1.12□□□□□ -2.23
Ccdc180J3QNE4 Gm21754-201ENSMUST00000177550 479 ntBASIC1.12□□□□□ -2.23
Ccdc180J3QNE4 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.12□□□□□ -2.23
Ccdc180J3QNE4 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.12□□□□□ -2.23
Ccdc180J3QNE4 Mir301-201ENSMUST00000083655 86 ntBASIC1.12□□□□□ -2.23
Ccdc180J3QNE4 Gm11857-201ENSMUST00000119817 324 ntBASIC1.11□□□□□ -2.23
Ccdc180J3QNE4 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Ccdc180J3QNE4 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Ccdc180J3QNE4 Gm37997-201ENSMUST00000193515 267 ntBASIC1.11□□□□□ -2.23
Ccdc180J3QNE4 Gm37720-201ENSMUST00000195497 1241 ntBASIC1.11□□□□□ -2.23
Ccdc180J3QNE4 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC1.11□□□□□ -2.23
Ccdc180J3QNE4 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Ccdc180J3QNE4 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Ccdc180J3QNE4 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.11□□□□□ -2.23
Ccdc180J3QNE4 Gm22537-201ENSMUST00000158172 199 ntBASIC1.1□□□□□ -2.23
Ccdc180J3QNE4 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.1□□□□□ -2.23
Ccdc180J3QNE4 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Ccdc180J3QNE4 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Ccdc180J3QNE4 Gm27477-201ENSMUST00000184649 143 ntBASIC1.1□□□□□ -2.23
Ccdc180J3QNE4 Gm19057-201ENSMUST00000194329 1197 ntBASIC1.1□□□□□ -2.23
Ccdc180J3QNE4 Gm19540-201ENSMUST00000221843 810 ntBASIC1.1□□□□□ -2.23
Ccdc180J3QNE4 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.1□□□□□ -2.23
Ccdc180J3QNE4 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Ccdc180J3QNE4 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Ccdc180J3QNE4 Gm11389-201ENSMUST00000121407 430 ntBASIC1.09□□□□□ -2.24
Ccdc180J3QNE4 Gm23053-201ENSMUST00000175136 96 ntBASIC1.09□□□□□ -2.24
Ccdc180J3QNE4 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
Ccdc180J3QNE4 Gm25759-201ENSMUST00000103988 129 ntBASIC1.08□□□□□ -2.24
Ccdc180J3QNE4 Gm11490-201ENSMUST00000118128 272 ntBASIC1.08□□□□□ -2.24
Ccdc180J3QNE4 Gm22944-201ENSMUST00000158662 133 ntBASIC1.08□□□□□ -2.24
Ccdc180J3QNE4 Gm44301-201ENSMUST00000200362 143 ntBASIC1.08□□□□□ -2.24
Ccdc180J3QNE4 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Ccdc180J3QNE4 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.08□□□□□ -2.24
Ccdc180J3QNE4 Mir669f-201ENSMUST00000103850 121 ntBASIC1.07□□□□□ -2.24
Ccdc180J3QNE4 Gm12096-201ENSMUST00000121149 829 ntBASIC1.07□□□□□ -2.24
Ccdc180J3QNE4 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Ccdc180J3QNE4 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Ccdc180J3QNE4 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC1.07□□□□□ -2.24
Ccdc180J3QNE4 Gm14049-201ENSMUST00000121009 636 ntBASIC1.07□□□□□ -2.24
Ccdc180J3QNE4 Gm37029-201ENSMUST00000195773 239 ntBASIC1.07□□□□□ -2.24
Ccdc180J3QNE4 Gm45616-201ENSMUST00000211711 319 ntBASIC1.07□□□□□ -2.24
Ccdc180J3QNE4 Gm19118-201ENSMUST00000222554 98 ntBASIC1.07□□□□□ -2.24
Ccdc180J3QNE4 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC1.07□□□□□ -2.24
Ccdc180J3QNE4 Gm37219-201ENSMUST00000192036 926 ntBASIC1.06□□□□□ -2.24
Ccdc180J3QNE4 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.06□□□□□ -2.24
Ccdc180J3QNE4 Gm23245-201ENSMUST00000083370 135 ntBASIC1.06□□□□□ -2.24
Ccdc180J3QNE4 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Ccdc180J3QNE4 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Ccdc180J3QNE4 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.05□□□□□ -2.24
Ccdc180J3QNE4 Gm20386-201ENSMUST00000174010 132 ntBASIC1.05□□□□□ -2.24
Ccdc180J3QNE4 Gm7897-201ENSMUST00000193981 554 ntBASIC1.05□□□□□ -2.24
Ccdc180J3QNE4 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.05□□□□□ -2.24
Ccdc180J3QNE4 Gm43245-201ENSMUST00000197603 468 ntBASIC1.05□□□□□ -2.24
Ccdc180J3QNE4 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
Ccdc180J3QNE4 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.05□□□□□ -2.24
Ccdc180J3QNE4 Gm14355-201ENSMUST00000117352 264 ntBASIC1.04□□□□□ -2.24
Ccdc180J3QNE4 Gm43316-201ENSMUST00000197252 1295 ntBASIC1.04□□□□□ -2.24
Ccdc180J3QNE4 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Ccdc180J3QNE4 Gm14980-201ENSMUST00000121247 736 ntBASIC1.04□□□□□ -2.24
Ccdc180J3QNE4 Gm29231-201ENSMUST00000179850 319 ntBASIC1.04□□□□□ -2.24
Ccdc180J3QNE4 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Ccdc180J3QNE4 Gm38113-201ENSMUST00000193704 201 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms