Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Mir193a-201ENSMUST00000083461 66 ntBASIC4.02□□□□□ -1.77
Ccdc9bA3KGF9 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc9bA3KGF9 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc9bA3KGF9 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ccdc9bA3KGF9 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
Ccdc9bA3KGF9 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc9bA3KGF9 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm22269-201ENSMUST00000104002 130 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm24403-201ENSMUST00000104616 130 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm15799-201ENSMUST00000120899 289 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm25615-201ENSMUST00000177836 94 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm6802-202ENSMUST00000186566 126 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm44474-201ENSMUST00000196525 127 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm44879-201ENSMUST00000207007 503 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm9377-201ENSMUST00000207227 623 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm44859-201ENSMUST00000207831 94 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm45539-201ENSMUST00000210313 428 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 AC157476.1-201ENSMUST00000215555 169 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm24356-201ENSMUST00000082859 106 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm22704-201ENSMUST00000083027 137 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Gm4746-201ENSMUST00000120395 2406 ntBASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc9bA3KGF9 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm23472-201ENSMUST00000101806 191 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm13432-201ENSMUST00000118861 241 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm14649-201ENSMUST00000121814 324 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm11204-201ENSMUST00000122438 147 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm22816-201ENSMUST00000157450 117 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm24751-201ENSMUST00000157844 102 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm24726-201ENSMUST00000158232 121 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm24106-201ENSMUST00000175498 127 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm24497-201ENSMUST00000177868 191 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Spin2g-201ENSMUST00000178425 687 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Mir713-201ENSMUST00000178651 108 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm28627-201ENSMUST00000186141 453 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm37923-201ENSMUST00000191624 161 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm37097-201ENSMUST00000193676 336 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 AC133189.1-201ENSMUST00000198820 140 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm46138-201ENSMUST00000215294 426 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm18188-201ENSMUST00000219386 478 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 AC121942.2-201ENSMUST00000223824 600 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 AC165106.2-201ENSMUST00000226749 97 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm23444-201ENSMUST00000082922 191 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Gm32444-201ENSMUST00000195147 3511 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4□□□□□ -1.77
Ccdc9bA3KGF9 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Gm45804-201ENSMUST00000212137 3435 ntBASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Gm25538-201ENSMUST00000101943 107 ntBASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Gm23709-201ENSMUST00000104364 130 ntBASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Gm25805-201ENSMUST00000122788 108 ntBASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Gm23209-201ENSMUST00000158667 110 ntBASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Ear-ps8-201ENSMUST00000161935 354 ntBASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Gm16545-201ENSMUST00000161968 463 ntBASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Mir5134-201ENSMUST00000175529 78 ntBASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Gm6660-201ENSMUST00000179149 468 ntBASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Gm45499-201ENSMUST00000211656 280 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms