Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm23792-201ENSMUST00000122557 93 ntBASIC1.03□□□□□ -2.24
Col6a4A2AX52 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.03□□□□□ -2.24
Col6a4A2AX52 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC1.03□□□□□ -2.24
Col6a4A2AX52 Gm26487-201ENSMUST00000158022 94 ntBASIC1.03□□□□□ -2.24
Col6a4A2AX52 Gm23008-201ENSMUST00000158946 80 ntBASIC1.03□□□□□ -2.24
Col6a4A2AX52 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC1.03□□□□□ -2.24
Col6a4A2AX52 Gm27520-201ENSMUST00000184872 81 ntBASIC1.03□□□□□ -2.24
Col6a4A2AX52 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.03□□□□□ -2.24
Col6a4A2AX52 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Col6a4A2AX52 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.03□□□□□ -2.24
Col6a4A2AX52 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.03□□□□□ -2.24
Col6a4A2AX52 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.03□□□□□ -2.24
Col6a4A2AX52 Gm45456-201ENSMUST00000210841 243 ntBASIC1.03□□□□□ -2.24
Col6a4A2AX52 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.03□□□□□ -2.24
Col6a4A2AX52 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.03□□□□□ -2.24
Col6a4A2AX52 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Col6a4A2AX52 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.03□□□□□ -2.24
Col6a4A2AX52 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Col6a4A2AX52 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Col6a4A2AX52 Gm22151-201ENSMUST00000116963 58 ntBASIC1.03□□□□□ -2.25
Col6a4A2AX52 Gm13331-201ENSMUST00000117500 448 ntBASIC1.03□□□□□ -2.25
Col6a4A2AX52 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC1.03□□□□□ -2.25
Col6a4A2AX52 Gm14815-201ENSMUST00000120060 488 ntBASIC1.03□□□□□ -2.25
Col6a4A2AX52 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC1.03□□□□□ -2.25
Col6a4A2AX52 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC1.03□□□□□ -2.25
Col6a4A2AX52 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC1.03□□□□□ -2.25
Col6a4A2AX52 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC1.03□□□□□ -2.25
Col6a4A2AX52 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC1.03□□□□□ -2.25
Col6a4A2AX52 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
Col6a4A2AX52 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.25
Col6a4A2AX52 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.02□□□□□ -2.25
Col6a4A2AX52 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Col6a4A2AX52 Gm6954-201ENSMUST00000117416 225 ntBASIC1.02□□□□□ -2.25
Col6a4A2AX52 Gm14238-201ENSMUST00000120227 323 ntBASIC1.02□□□□□ -2.25
Col6a4A2AX52 Gm23463-201ENSMUST00000122468 99 ntBASIC1.02□□□□□ -2.25
Col6a4A2AX52 Mup-ps12-201ENSMUST00000126217 549 ntBASIC1.02□□□□□ -2.25
Col6a4A2AX52 Gm8161-201ENSMUST00000168739 481 ntBASIC1.02□□□□□ -2.25
Col6a4A2AX52 Gm20415-201ENSMUST00000172877 423 ntBASIC1.02□□□□□ -2.25
Col6a4A2AX52 Gm22131-201ENSMUST00000178415 94 ntBASIC1.02□□□□□ -2.25
Col6a4A2AX52 Gm22252-201ENSMUST00000179316 79 ntBASIC1.02□□□□□ -2.25
Col6a4A2AX52 Gm45614-201ENSMUST00000209994 721 ntBASIC1.02□□□□□ -2.25
Col6a4A2AX52 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC1.02□□□□□ -2.25
Col6a4A2AX52 Gm35558-202ENSMUST00000221819 499 ntBASIC1.02□□□□□ -2.25
Col6a4A2AX52 CT030159.4-201ENSMUST00000221966 395 ntBASIC1.02□□□□□ -2.25
Col6a4A2AX52 Gm23247-201ENSMUST00000083373 107 ntBASIC1.02□□□□□ -2.25
Col6a4A2AX52 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC1.02□□□□□ -2.25
Col6a4A2AX52 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Col6a4A2AX52 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm23120-201ENSMUST00000157654 287 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm24467-201ENSMUST00000157887 126 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm25332-201ENSMUST00000158038 105 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm44462-201ENSMUST00000199696 129 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Col6a4A2AX52 AC154257.2-201ENSMUST00000224166 340 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm24252-201ENSMUST00000083700 132 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm25409-201ENSMUST00000083764 131 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.01□□□□□ -2.25
Col6a4A2AX52 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Col6a4A2AX52 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm25097-201ENSMUST00000104042 145 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm15530-201ENSMUST00000122206 555 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm25391-201ENSMUST00000157342 134 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm25026-201ENSMUST00000175017 188 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm19202-201ENSMUST00000198096 808 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm43894-201ENSMUST00000203274 688 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm6590-201ENSMUST00000203343 687 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm5317-201ENSMUST00000204445 847 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm44666-201ENSMUST00000208544 391 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm44657-201ENSMUST00000208568 450 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm26439-201ENSMUST00000082592 106 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm23727-201ENSMUST00000083352 164 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm16261-201ENSMUST00000096813 205 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.01□□□□□ -2.25
Col6a4A2AX52 Gm23991-201ENSMUST00000117033 93 ntBASIC1□□□□□ -2.25
Col6a4A2AX52 Gm14128-201ENSMUST00000119514 1011 ntBASIC1□□□□□ -2.25
Col6a4A2AX52 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC1□□□□□ -2.25
Col6a4A2AX52 Gm25624-201ENSMUST00000157222 275 ntBASIC1□□□□□ -2.25
Col6a4A2AX52 Gm24002-201ENSMUST00000158456 104 ntBASIC1□□□□□ -2.25
Col6a4A2AX52 Gm25658-201ENSMUST00000158472 128 ntBASIC1□□□□□ -2.25
Col6a4A2AX52 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC1□□□□□ -2.25
Col6a4A2AX52 Gm20698-201ENSMUST00000175657 233 ntBASIC1□□□□□ -2.25
Col6a4A2AX52 Mir7063-201ENSMUST00000184158 91 ntBASIC1□□□□□ -2.25
Col6a4A2AX52 Gm6651-201ENSMUST00000189471 271 ntBASIC1□□□□□ -2.25
Col6a4A2AX52 Trbv6-201ENSMUST00000193743 276 ntBASIC1□□□□□ -2.25
Col6a4A2AX52 Gm7065-201ENSMUST00000222150 474 ntBASIC1□□□□□ -2.25
Col6a4A2AX52 n-R5s197-201ENSMUST00000083302 119 ntBASIC1□□□□□ -2.25
Col6a4A2AX52 Gm24412-201ENSMUST00000083426 109 ntBASIC1□□□□□ -2.25
Col6a4A2AX52 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Col6a4A2AX52 Gm44177-201ENSMUST00000204338 2667 ntBASIC1□□□□□ -2.25
Col6a4A2AX52 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Col6a4A2AX52 Gm23431-201ENSMUST00000104006 107 ntBASIC1□□□□□ -2.25
Col6a4A2AX52 Gm14129-201ENSMUST00000122436 291 ntBASIC1□□□□□ -2.25
Col6a4A2AX52 Gm4916-201ENSMUST00000126139 642 ntBASIC1□□□□□ -2.25
Col6a4A2AX52 Gm26414-201ENSMUST00000157674 269 ntBASIC1□□□□□ -2.25
Col6a4A2AX52 Gm24875-201ENSMUST00000158888 104 ntBASIC1□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms