Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm23667-201ENSMUST00000157466 120 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm19932-201ENSMUST00000177033 313 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm18588-201ENSMUST00000177308 492 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm21893-201ENSMUST00000179119 397 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm26622-201ENSMUST00000180520 298 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm9022-202ENSMUST00000183285 483 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm27783-201ENSMUST00000183534 105 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm27330-201ENSMUST00000184689 132 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm29192-201ENSMUST00000190942 377 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm44476-201ENSMUST00000196225 91 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm44964-201ENSMUST00000207011 273 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
H2afb1S4R1E0 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Snora23-201ENSMUST00000082517 184 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm24037-201ENSMUST00000082871 180 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm25199-201ENSMUST00000083095 104 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm24045-201ENSMUST00000083113 98 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm25411-201ENSMUST00000083760 151 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Gm23847-201ENSMUST00000083829 110 ntBASIC2.59□□□□□ -1.99
H2afb1S4R1E0 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm25526-201ENSMUST00000104332 132 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm14448-201ENSMUST00000116383 210 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm12617-201ENSMUST00000121268 381 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm6265-201ENSMUST00000149263 231 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm25970-201ENSMUST00000157165 86 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm23380-201ENSMUST00000158448 103 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm23409-201ENSMUST00000158516 237 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm24418-201ENSMUST00000177597 79 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm24639-201ENSMUST00000178518 79 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm23076-201ENSMUST00000179082 79 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm25077-201ENSMUST00000179157 79 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC2.58□□□□□ -2
H2afb1S4R1E0 Mir6353-201ENSMUST00000183596 113 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm27385-201ENSMUST00000184747 104 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm27588-201ENSMUST00000185096 263 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm38050-201ENSMUST00000191904 238 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm44726-201ENSMUST00000203427 217 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm43932-201ENSMUST00000204499 52 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm45252-201ENSMUST00000211579 397 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm45402-201ENSMUST00000211796 223 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC2.58□□□□□ -2
H2afb1S4R1E0 AC107757.3-201ENSMUST00000226312 535 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
H2afb1S4R1E0 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
H2afb1S4R1E0 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.58□□□□□ -2
H2afb1S4R1E0 Gm381-201ENSMUST00000117443 2037 ntBASIC2.58□□□□□ -2
H2afb1S4R1E0 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
H2afb1S4R1E0 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
H2afb1S4R1E0 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
H2afb1S4R1E0 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
H2afb1S4R1E0 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
H2afb1S4R1E0 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.57□□□□□ -2
H2afb1S4R1E0 Gm24280-201ENSMUST00000104237 134 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.57□□□□□ -2
H2afb1S4R1E0 Gm16354-201ENSMUST00000155376 150 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Gm23325-201ENSMUST00000157422 129 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Gm24475-201ENSMUST00000157435 143 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Gm24419-201ENSMUST00000157875 332 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Gm22836-201ENSMUST00000158441 61 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Gm24546-201ENSMUST00000158652 102 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Gm22136-201ENSMUST00000158751 268 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Gm8207-201ENSMUST00000171204 502 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Gm26430-201ENSMUST00000178054 107 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.57□□□□□ -2
H2afb1S4R1E0 Mir6338-201ENSMUST00000183389 109 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC2.57□□□□□ -2
H2afb1S4R1E0 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.57□□□□□ -2
H2afb1S4R1E0 Gm18982-201ENSMUST00000198118 529 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Gm44041-201ENSMUST00000203678 396 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.57□□□□□ -2
H2afb1S4R1E0 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.57□□□□□ -2
H2afb1S4R1E0 Gm22364-201ENSMUST00000083097 98 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Gm25578-201ENSMUST00000083406 104 ntBASIC2.57□□□□□ -2
H2afb1S4R1E0 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms