Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Mir6943-201ENSMUST00000185186 66 ntBASIC4.75□□□□□ -1.65
Prpf40aQ9R1C7 Gm43586-201ENSMUST00000195948 310 ntBASIC4.75□□□□□ -1.65
Prpf40aQ9R1C7 Gm9238-201ENSMUST00000196181 329 ntBASIC4.75□□□□□ -1.65
Prpf40aQ9R1C7 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.75□□□□□ -1.65
Prpf40aQ9R1C7 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.75□□□□□ -1.65
Prpf40aQ9R1C7 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.75□□□□□ -1.65
Prpf40aQ9R1C7 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.75□□□□□ -1.65
Prpf40aQ9R1C7 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Prpf40aQ9R1C7 Gm23510-201ENSMUST00000083083 163 ntBASIC4.75□□□□□ -1.65
Prpf40aQ9R1C7 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.75□□□□□ -1.65
Prpf40aQ9R1C7 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Prpf40aQ9R1C7 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.75□□□□□ -1.65
Prpf40aQ9R1C7 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Gm45662-201ENSMUST00000210054 2098 ntBASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Gm15936-201ENSMUST00000118706 460 ntBASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Gm15926-201ENSMUST00000120492 550 ntBASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Gm25115-201ENSMUST00000157187 140 ntBASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Gm24106-201ENSMUST00000175498 127 ntBASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 AC153646.2-201ENSMUST00000220516 109 ntBASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Prpf40aQ9R1C7 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 AC117226.1-201ENSMUST00000221635 3737 ntBASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Gm24855-201ENSMUST00000104848 97 ntBASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Gm13155-201ENSMUST00000119277 646 ntBASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Gm14845-201ENSMUST00000121259 306 ntBASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Gm8178-201ENSMUST00000121570 646 ntBASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Gm23713-201ENSMUST00000157353 70 ntBASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Gm22615-201ENSMUST00000158102 70 ntBASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Gm23209-201ENSMUST00000158667 110 ntBASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Gm26200-201ENSMUST00000180273 79 ntBASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Gm37670-201ENSMUST00000193622 229 ntBASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Gm37836-201ENSMUST00000195875 175 ntBASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 AC121942.2-201ENSMUST00000223824 600 ntBASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 AC166830.2-201ENSMUST00000225821 196 ntBASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Gm22704-201ENSMUST00000083027 137 ntBASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Synpr-207ENSMUST00000223583 3362 ntBASIC4.73□□□□□ -1.65
Prpf40aQ9R1C7 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Gm23948-201ENSMUST00000104030 132 ntBASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Mir872-201ENSMUST00000104728 81 ntBASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Gm22320-201ENSMUST00000157149 312 ntBASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Ear-ps8-201ENSMUST00000161935 354 ntBASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Gm28627-201ENSMUST00000186141 453 ntBASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Gm44521-201ENSMUST00000206469 217 ntBASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Gm44859-201ENSMUST00000207831 94 ntBASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Gm8942-201ENSMUST00000217892 400 ntBASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Gm18188-201ENSMUST00000219386 478 ntBASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Prpf40aQ9R1C7 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.71□□□□□ -1.65
Prpf40aQ9R1C7 Svet1-201ENSMUST00000209370 3940 ntBASIC4.71□□□□□ -1.65
Prpf40aQ9R1C7 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.71□□□□□ -1.65
Prpf40aQ9R1C7 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Prpf40aQ9R1C7 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Prpf40aQ9R1C7 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.71□□□□□ -1.66
Prpf40aQ9R1C7 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Prpf40aQ9R1C7 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Prpf40aQ9R1C7 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Prpf40aQ9R1C7 Gm23472-201ENSMUST00000101806 191 ntBASIC4.71□□□□□ -1.66
Prpf40aQ9R1C7 Gm25538-201ENSMUST00000101943 107 ntBASIC4.71□□□□□ -1.66
Prpf40aQ9R1C7 Gm25915-201ENSMUST00000104265 126 ntBASIC4.71□□□□□ -1.66
Prpf40aQ9R1C7 Gm14922-201ENSMUST00000121131 163 ntBASIC4.71□□□□□ -1.66
Prpf40aQ9R1C7 Gm10444-201ENSMUST00000126708 148 ntBASIC4.71□□□□□ -1.66
Prpf40aQ9R1C7 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms