Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm22485-201ENSMUST00000157990 109 ntBASIC1.16□□□□□ -2.22
Scn11aQ9R053 Gm16546-201ENSMUST00000159442 355 ntBASIC1.16□□□□□ -2.22
Scn11aQ9R053 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC1.16□□□□□ -2.22
Scn11aQ9R053 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC1.16□□□□□ -2.22
Scn11aQ9R053 Gm28453-203ENSMUST00000187041 189 ntBASIC1.16□□□□□ -2.22
Scn11aQ9R053 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.16□□□□□ -2.22
Scn11aQ9R053 Gm7897-201ENSMUST00000193981 554 ntBASIC1.16□□□□□ -2.22
Scn11aQ9R053 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.16□□□□□ -2.22
Scn11aQ9R053 Gm18611-201ENSMUST00000200334 1118 ntBASIC1.16□□□□□ -2.22
Scn11aQ9R053 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.16□□□□□ -2.22
Scn11aQ9R053 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC1.16□□□□□ -2.22
Scn11aQ9R053 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Scn11aQ9R053 Mir141-201ENSMUST00000083540 72 ntBASIC1.16□□□□□ -2.22
Scn11aQ9R053 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.15□□□□□ -2.23
Scn11aQ9R053 Gm24262-201ENSMUST00000157431 144 ntBASIC1.15□□□□□ -2.23
Scn11aQ9R053 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.15□□□□□ -2.23
Scn11aQ9R053 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.15□□□□□ -2.23
Scn11aQ9R053 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.15□□□□□ -2.23
Scn11aQ9R053 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.15□□□□□ -2.23
Scn11aQ9R053 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.15□□□□□ -2.23
Scn11aQ9R053 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.15□□□□□ -2.23
Scn11aQ9R053 Gm11490-201ENSMUST00000118128 272 ntBASIC1.14□□□□□ -2.23
Scn11aQ9R053 Gm11786-201ENSMUST00000120799 155 ntBASIC1.14□□□□□ -2.23
Scn11aQ9R053 Gm23466-201ENSMUST00000157133 106 ntBASIC1.14□□□□□ -2.23
Scn11aQ9R053 Gm23355-201ENSMUST00000177614 107 ntBASIC1.14□□□□□ -2.23
Scn11aQ9R053 Gm23721-201ENSMUST00000083005 107 ntBASIC1.14□□□□□ -2.23
Scn11aQ9R053 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC1.13□□□□□ -2.23
Scn11aQ9R053 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC1.13□□□□□ -2.23
Scn11aQ9R053 Gm28862-201ENSMUST00000188246 163 ntBASIC1.13□□□□□ -2.23
Scn11aQ9R053 Gm9632-201ENSMUST00000195934 643 ntBASIC1.13□□□□□ -2.23
Scn11aQ9R053 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC1.13□□□□□ -2.23
Scn11aQ9R053 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.13□□□□□ -2.23
Scn11aQ9R053 Gm14786-201ENSMUST00000117127 944 ntBASIC1.13□□□□□ -2.23
Scn11aQ9R053 Gm14355-201ENSMUST00000117352 264 ntBASIC1.13□□□□□ -2.23
Scn11aQ9R053 Gm15110-201ENSMUST00000117545 881 ntBASIC1.13□□□□□ -2.23
Scn11aQ9R053 Gm15659-201ENSMUST00000118881 341 ntBASIC1.13□□□□□ -2.23
Scn11aQ9R053 Gm15113-201ENSMUST00000119280 836 ntBASIC1.13□□□□□ -2.23
Scn11aQ9R053 Gm15112-201ENSMUST00000120152 860 ntBASIC1.13□□□□□ -2.23
Scn11aQ9R053 Gm20386-201ENSMUST00000174010 132 ntBASIC1.13□□□□□ -2.23
Scn11aQ9R053 Gm42824-201ENSMUST00000199361 247 ntBASIC1.13□□□□□ -2.23
Scn11aQ9R053 Gm18645-202ENSMUST00000212222 760 ntBASIC1.13□□□□□ -2.23
Scn11aQ9R053 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC1.13□□□□□ -2.23
Scn11aQ9R053 Gm22507-201ENSMUST00000082773 160 ntBASIC1.13□□□□□ -2.23
Scn11aQ9R053 Gm24920-201ENSMUST00000083018 85 ntBASIC1.13□□□□□ -2.23
Scn11aQ9R053 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Scn11aQ9R053 Gm11785-201ENSMUST00000120165 601 ntBASIC1.12□□□□□ -2.23
Scn11aQ9R053 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC1.12□□□□□ -2.23
Scn11aQ9R053 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.12□□□□□ -2.23
Scn11aQ9R053 Gm25730-201ENSMUST00000178753 165 ntBASIC1.12□□□□□ -2.23
Scn11aQ9R053 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Scn11aQ9R053 Gm10925-201ENSMUST00000189941 678 ntBASIC1.12□□□□□ -2.23
Scn11aQ9R053 Gm17937-201ENSMUST00000197908 742 ntBASIC1.12□□□□□ -2.23
Scn11aQ9R053 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC1.12□□□□□ -2.23
Scn11aQ9R053 Gm46994-201ENSMUST00000221523 219 ntBASIC1.12□□□□□ -2.23
Scn11aQ9R053 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC1.12□□□□□ -2.23
Scn11aQ9R053 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.12□□□□□ -2.23
Scn11aQ9R053 Gm22689-201ENSMUST00000102452 110 ntBASIC1.11□□□□□ -2.23
Scn11aQ9R053 Gm14899-201ENSMUST00000118673 548 ntBASIC1.11□□□□□ -2.23
Scn11aQ9R053 Gm23605-201ENSMUST00000157255 127 ntBASIC1.11□□□□□ -2.23
Scn11aQ9R053 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.11□□□□□ -2.23
Scn11aQ9R053 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.11□□□□□ -2.23
Scn11aQ9R053 Gm43541-201ENSMUST00000197208 581 ntBASIC1.11□□□□□ -2.23
Scn11aQ9R053 Gm19540-201ENSMUST00000221843 810 ntBASIC1.11□□□□□ -2.23
Scn11aQ9R053 Gm24611-201ENSMUST00000083272 107 ntBASIC1.11□□□□□ -2.23
Scn11aQ9R053 Gm14008-201ENSMUST00000120483 274 ntBASIC1.11□□□□□ -2.23
Scn11aQ9R053 Gm23053-201ENSMUST00000175136 96 ntBASIC1.11□□□□□ -2.23
Scn11aQ9R053 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.11□□□□□ -2.23
Scn11aQ9R053 Gm9830-201ENSMUST00000178509 357 ntBASIC1.11□□□□□ -2.23
Scn11aQ9R053 Mir6393-201ENSMUST00000183709 94 ntBASIC1.11□□□□□ -2.23
Scn11aQ9R053 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Scn11aQ9R053 Mir301-201ENSMUST00000083655 86 ntBASIC1.11□□□□□ -2.23
Scn11aQ9R053 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.1□□□□□ -2.23
Scn11aQ9R053 Gm25994-201ENSMUST00000175392 101 ntBASIC1.1□□□□□ -2.23
Scn11aQ9R053 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.1□□□□□ -2.23
Scn11aQ9R053 Gm17976-201ENSMUST00000184037 1909 ntBASIC1.1□□□□□ -2.23
Scn11aQ9R053 Gm44656-201ENSMUST00000208428 490 ntBASIC1.1□□□□□ -2.23
Scn11aQ9R053 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.1□□□□□ -2.23
Scn11aQ9R053 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.1□□□□□ -2.23
Scn11aQ9R053 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Scn11aQ9R053 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Scn11aQ9R053 Gm22217-201ENSMUST00000157556 313 ntBASIC1.09□□□□□ -2.23
Scn11aQ9R053 Gm25669-201ENSMUST00000157699 112 ntBASIC1.09□□□□□ -2.23
Scn11aQ9R053 Gm27711-201ENSMUST00000183802 118 ntBASIC1.09□□□□□ -2.23
Scn11aQ9R053 Gm28437-201ENSMUST00000190277 783 ntBASIC1.09□□□□□ -2.23
Scn11aQ9R053 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC1.09□□□□□ -2.23
Scn11aQ9R053 Gm19118-201ENSMUST00000222554 98 ntBASIC1.09□□□□□ -2.23
Scn11aQ9R053 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Scn11aQ9R053 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Scn11aQ9R053 Gm14835-201ENSMUST00000119039 315 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 Gm27160-201ENSMUST00000184837 199 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.08□□□□□ -2.24
Scn11aQ9R053 Gm17990-201ENSMUST00000211728 553 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Scn11aQ9R053 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC1.08□□□□□ -2.24
Scn11aQ9R053 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
Scn11aQ9R053 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.08□□□□□ -2.24
Scn11aQ9R053 Mir1904-201ENSMUST00000122702 80 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 127.2 ms