Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm23893-201ENSMUST00000158106 134 ntBASIC0.59□□□□□ -2.31
Smco4Q9JIS3 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.59□□□□□ -2.31
Smco4Q9JIS3 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Smco4Q9JIS3 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.59□□□□□ -2.31
Smco4Q9JIS3 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.59□□□□□ -2.31
Smco4Q9JIS3 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.59□□□□□ -2.31
Smco4Q9JIS3 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.59□□□□□ -2.31
Smco4Q9JIS3 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.59□□□□□ -2.31
Smco4Q9JIS3 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.59□□□□□ -2.31
Smco4Q9JIS3 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.59□□□□□ -2.31
Smco4Q9JIS3 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.59□□□□□ -2.31
Smco4Q9JIS3 Gm16399-201ENSMUST00000181423 219 ntBASIC0.59□□□□□ -2.31
Smco4Q9JIS3 Gm37579-201ENSMUST00000194291 142 ntBASIC0.59□□□□□ -2.31
Smco4Q9JIS3 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC0.59□□□□□ -2.31
Smco4Q9JIS3 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.59□□□□□ -2.31
Smco4Q9JIS3 AC173482.2-201ENSMUST00000224044 750 ntBASIC0.59□□□□□ -2.31
Smco4Q9JIS3 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.59□□□□□ -2.31
Smco4Q9JIS3 AC165106.2-201ENSMUST00000226749 97 ntBASIC0.59□□□□□ -2.31
Smco4Q9JIS3 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC0.59□□□□□ -2.31
Smco4Q9JIS3 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
Smco4Q9JIS3 Gm23735-201ENSMUST00000082551 134 ntBASIC0.59□□□□□ -2.31
Smco4Q9JIS3 Snora41-201ENSMUST00000082668 132 ntBASIC0.59□□□□□ -2.31
Smco4Q9JIS3 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
Smco4Q9JIS3 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Smco4Q9JIS3 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC0.58□□□□□ -2.32
Smco4Q9JIS3 Gm23705-201ENSMUST00000104370 130 ntBASIC0.58□□□□□ -2.32
Smco4Q9JIS3 Igkv13-87-201ENSMUST00000114214 286 ntBASIC0.58□□□□□ -2.32
Smco4Q9JIS3 Gm22713-201ENSMUST00000116895 130 ntBASIC0.58□□□□□ -2.32
Smco4Q9JIS3 Gm11471-201ENSMUST00000121824 198 ntBASIC0.58□□□□□ -2.32
Smco4Q9JIS3 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC0.58□□□□□ -2.32
Smco4Q9JIS3 Gm17154-201ENSMUST00000165748 431 ntBASIC0.58□□□□□ -2.32
Smco4Q9JIS3 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.58□□□□□ -2.32
Smco4Q9JIS3 Gm20630-201ENSMUST00000177387 551 ntBASIC0.58□□□□□ -2.32
Smco4Q9JIS3 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Smco4Q9JIS3 Gm28000-201ENSMUST00000184380 85 ntBASIC0.58□□□□□ -2.32
Smco4Q9JIS3 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.58□□□□□ -2.32
Smco4Q9JIS3 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Smco4Q9JIS3 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC0.58□□□□□ -2.32
Smco4Q9JIS3 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC0.58□□□□□ -2.32
Smco4Q9JIS3 Gm24919-201ENSMUST00000083020 106 ntBASIC0.58□□□□□ -2.32
Smco4Q9JIS3 Gm25971-201ENSMUST00000158953 286 ntBASIC0.57□□□□□ -2.32
Smco4Q9JIS3 Gm21754-201ENSMUST00000177550 479 ntBASIC0.57□□□□□ -2.32
Smco4Q9JIS3 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC0.57□□□□□ -2.32
Smco4Q9JIS3 Mir7017-201ENSMUST00000184894 62 ntBASIC0.57□□□□□ -2.32
Smco4Q9JIS3 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
Smco4Q9JIS3 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
Smco4Q9JIS3 Gm19123-201ENSMUST00000190716 651 ntBASIC0.57□□□□□ -2.32
Smco4Q9JIS3 Gm37162-201ENSMUST00000191708 551 ntBASIC0.57□□□□□ -2.32
Smco4Q9JIS3 Gm44482-201ENSMUST00000199232 103 ntBASIC0.57□□□□□ -2.32
Smco4Q9JIS3 Gm18414-201ENSMUST00000210858 694 ntBASIC0.57□□□□□ -2.32
Smco4Q9JIS3 AC138401.1-201ENSMUST00000221533 116 ntBASIC0.57□□□□□ -2.32
Smco4Q9JIS3 Gm24252-201ENSMUST00000083700 132 ntBASIC0.57□□□□□ -2.32
Smco4Q9JIS3 Snord7-201ENSMUST00000083781 97 ntBASIC0.57□□□□□ -2.32
Smco4Q9JIS3 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.57□□□□□ -2.32
Smco4Q9JIS3 Gm14979-201ENSMUST00000121561 1035 ntBASIC0.56□□□□□ -2.32
Smco4Q9JIS3 Gm25544-201ENSMUST00000122676 120 ntBASIC0.56□□□□□ -2.32
Smco4Q9JIS3 n-R5s150-201ENSMUST00000122705 108 ntBASIC0.56□□□□□ -2.32
Smco4Q9JIS3 Gm25454-201ENSMUST00000157947 315 ntBASIC0.56□□□□□ -2.32
Smco4Q9JIS3 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Smco4Q9JIS3 Gm17052-201ENSMUST00000165496 289 ntBASIC0.56□□□□□ -2.32
Smco4Q9JIS3 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.56□□□□□ -2.32
Smco4Q9JIS3 Mir3098-201ENSMUST00000175416 87 ntBASIC0.56□□□□□ -2.32
Smco4Q9JIS3 Gm23933-201ENSMUST00000178405 79 ntBASIC0.56□□□□□ -2.32
Smco4Q9JIS3 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC0.56□□□□□ -2.32
Smco4Q9JIS3 Mir7068-201ENSMUST00000183439 74 ntBASIC0.56□□□□□ -2.32
Smco4Q9JIS3 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC0.56□□□□□ -2.32
Smco4Q9JIS3 Mir7081-201ENSMUST00000184490 75 ntBASIC0.56□□□□□ -2.32
Smco4Q9JIS3 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC0.56□□□□□ -2.32
Smco4Q9JIS3 Gm18268-201ENSMUST00000208445 943 ntBASIC0.56□□□□□ -2.32
Smco4Q9JIS3 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC0.56□□□□□ -2.32
Smco4Q9JIS3 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.56□□□□□ -2.32
Smco4Q9JIS3 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.56□□□□□ -2.32
Smco4Q9JIS3 AC126275.1-201ENSMUST00000224881 446 ntBASIC0.56□□□□□ -2.32
Smco4Q9JIS3 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.56□□□□□ -2.32
Smco4Q9JIS3 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Smco4Q9JIS3 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
Smco4Q9JIS3 Mir301b-201ENSMUST00000102333 97 ntBASIC0.55□□□□□ -2.32
Smco4Q9JIS3 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Smco4Q9JIS3 Snord65-201ENSMUST00000104269 72 ntBASIC0.55□□□□□ -2.32
Smco4Q9JIS3 Gm4916-201ENSMUST00000126139 642 ntBASIC0.55□□□□□ -2.32
Smco4Q9JIS3 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC0.55□□□□□ -2.32
Smco4Q9JIS3 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC0.55□□□□□ -2.32
Smco4Q9JIS3 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.55□□□□□ -2.32
Smco4Q9JIS3 Gm7953-201ENSMUST00000168278 469 ntBASIC0.55□□□□□ -2.32
Smco4Q9JIS3 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC0.55□□□□□ -2.32
Smco4Q9JIS3 Trbv22-201ENSMUST00000191697 291 ntBASIC0.55□□□□□ -2.32
Smco4Q9JIS3 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC0.55□□□□□ -2.32
Smco4Q9JIS3 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
Smco4Q9JIS3 Gm22293-201ENSMUST00000083314 109 ntBASIC0.55□□□□□ -2.32
Smco4Q9JIS3 Gm44114-201ENSMUST00000203270 2727 ntBASIC0.55□□□□□ -2.32
Smco4Q9JIS3 Gm44679-201ENSMUST00000207202 2908 ntBASIC0.54□□□□□ -2.32
Smco4Q9JIS3 Gm15088-201ENSMUST00000117973 1508 ntBASIC0.54□□□□□ -2.32
Smco4Q9JIS3 Gm15098-201ENSMUST00000119036 1508 ntBASIC0.54□□□□□ -2.32
Smco4Q9JIS3 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Smco4Q9JIS3 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Smco4Q9JIS3 Gm14823-201ENSMUST00000117698 238 ntBASIC0.54□□□□□ -2.32
Smco4Q9JIS3 Gm15312-201ENSMUST00000118827 271 ntBASIC0.54□□□□□ -2.32
Smco4Q9JIS3 Gm11352-201ENSMUST00000119264 517 ntBASIC0.54□□□□□ -2.32
Smco4Q9JIS3 Gm14360-201ENSMUST00000120670 393 ntBASIC0.54□□□□□ -2.32
Smco4Q9JIS3 Gm17711-201ENSMUST00000172028 237 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms