Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm18551-201ENSMUST00000195594 642 ntBASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.34□□□□□ -1.87
Trim54Q9ERP3 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.34□□□□□ -1.87
Trim54Q9ERP3 AC104832.1-201ENSMUST00000222938 550 ntBASIC3.34□□□□□ -1.87
Trim54Q9ERP3 LOC667541-201ENSMUST00000223408 278 ntBASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trim54Q9ERP3 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.34□□□□□ -1.88
Trim54Q9ERP3 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.34□□□□□ -1.88
Trim54Q9ERP3 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.34□□□□□ -1.88
Trim54Q9ERP3 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Trim54Q9ERP3 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Mir669d-2-201ENSMUST00000116854 86 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Gm12255-201ENSMUST00000117184 284 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Gm13541-201ENSMUST00000119519 283 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Gm13717-201ENSMUST00000119868 365 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Gm16289-201ENSMUST00000162079 183 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Gm17072-201ENSMUST00000166673 658 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Gm8114-201ENSMUST00000172225 484 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Gm24810-201ENSMUST00000175317 70 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Gm20794-201ENSMUST00000177626 628 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Mir6917-201ENSMUST00000184111 61 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Mir6916-201ENSMUST00000184514 63 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Mir691-201ENSMUST00000199719 78 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Gm44520-201ENSMUST00000205447 802 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Gm30534-201ENSMUST00000217928 207 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Gm19326-201ENSMUST00000219818 326 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 AC167229.1-201ENSMUST00000220057 469 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Gm20102-201ENSMUST00000222445 220 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 AC122393.1-201ENSMUST00000226570 319 ntBASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trim54Q9ERP3 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trim54Q9ERP3 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trim54Q9ERP3 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Gm26396-201ENSMUST00000104093 132 ntBASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Gm24671-201ENSMUST00000104159 158 ntBASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Gm23987-201ENSMUST00000117039 129 ntBASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Gm13339-201ENSMUST00000120651 510 ntBASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Gm12779-201ENSMUST00000121496 143 ntBASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Gm13424-201ENSMUST00000122301 354 ntBASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Gm15914-201ENSMUST00000161922 309 ntBASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Gm26430-201ENSMUST00000178054 107 ntBASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Mir6371-201ENSMUST00000184470 111 ntBASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Gm29350-201ENSMUST00000189141 541 ntBASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Gm43402-201ENSMUST00000197159 159 ntBASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Gm43624-201ENSMUST00000197368 180 ntBASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trim54Q9ERP3 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Snord116l9-201ENSMUST00000101891 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm26504-201ENSMUST00000102033 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Mir291a-201ENSMUST00000104815 82 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm15399-201ENSMUST00000118055 724 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm24839-201ENSMUST00000122602 107 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm26278-201ENSMUST00000157098 132 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm25434-201ENSMUST00000158278 167 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm26502-201ENSMUST00000177732 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Snord116l13-201ENSMUST00000177737 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm25350-201ENSMUST00000177849 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Snord116l15-201ENSMUST00000177940 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm23446-201ENSMUST00000177977 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Snord116l4-201ENSMUST00000177982 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm26201-201ENSMUST00000178047 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm24711-201ENSMUST00000178062 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm24609-201ENSMUST00000178166 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm23265-201ENSMUST00000178321 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm22812-201ENSMUST00000178329 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Snord116l3-201ENSMUST00000178370 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm26246-201ENSMUST00000178388 94 ntBASIC3.31□□□□□ -1.88
Trim54Q9ERP3 Gm25155-201ENSMUST00000178450 94 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms