Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm25220-201ENSMUST00000157546 95 ntBASIC1.22□□□□□ -2.21
Cpsf1Q9EPU4 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.22□□□□□ -2.21
Cpsf1Q9EPU4 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.22□□□□□ -2.21
Cpsf1Q9EPU4 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Cpsf1Q9EPU4 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.22□□□□□ -2.21
Cpsf1Q9EPU4 AC159293.2-201ENSMUST00000222289 424 ntBASIC1.22□□□□□ -2.21
Cpsf1Q9EPU4 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Cpsf1Q9EPU4 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Cpsf1Q9EPU4 Gm6913-201ENSMUST00000100019 348 ntBASIC1.21□□□□□ -2.22
Cpsf1Q9EPU4 Gm24579-201ENSMUST00000103964 144 ntBASIC1.21□□□□□ -2.22
Cpsf1Q9EPU4 Gm23126-201ENSMUST00000104260 134 ntBASIC1.21□□□□□ -2.22
Cpsf1Q9EPU4 Gm14558-201ENSMUST00000117458 381 ntBASIC1.21□□□□□ -2.22
Cpsf1Q9EPU4 Gm11797-201ENSMUST00000121336 754 ntBASIC1.21□□□□□ -2.22
Cpsf1Q9EPU4 Gm1989-201ENSMUST00000126244 636 ntBASIC1.21□□□□□ -2.22
Cpsf1Q9EPU4 Gm17162-201ENSMUST00000168538 473 ntBASIC1.21□□□□□ -2.22
Cpsf1Q9EPU4 Gm17164-201ENSMUST00000169013 506 ntBASIC1.21□□□□□ -2.22
Cpsf1Q9EPU4 Gm18551-201ENSMUST00000195594 642 ntBASIC1.21□□□□□ -2.22
Cpsf1Q9EPU4 Gm44052-201ENSMUST00000203382 396 ntBASIC1.21□□□□□ -2.22
Cpsf1Q9EPU4 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.21□□□□□ -2.22
Cpsf1Q9EPU4 AC116395.1-201ENSMUST00000225480 1143 ntBASIC1.21□□□□□ -2.22
Cpsf1Q9EPU4 Gm25080-201ENSMUST00000082526 107 ntBASIC1.21□□□□□ -2.22
Cpsf1Q9EPU4 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.21□□□□□ -2.22
Cpsf1Q9EPU4 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Cpsf1Q9EPU4 Gm14771-201ENSMUST00000118249 203 ntBASIC1.2□□□□□ -2.22
Cpsf1Q9EPU4 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.2□□□□□ -2.22
Cpsf1Q9EPU4 Gm44462-201ENSMUST00000199696 129 ntBASIC1.2□□□□□ -2.22
Cpsf1Q9EPU4 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
Cpsf1Q9EPU4 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Cpsf1Q9EPU4 Gm18488-201ENSMUST00000215082 364 ntBASIC1.2□□□□□ -2.22
Cpsf1Q9EPU4 AC134254.4-201ENSMUST00000223086 370 ntBASIC1.2□□□□□ -2.22
Cpsf1Q9EPU4 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Cpsf1Q9EPU4 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Cpsf1Q9EPU4 Gm24288-201ENSMUST00000157630 144 ntBASIC1.19□□□□□ -2.22
Cpsf1Q9EPU4 Gm22483-201ENSMUST00000157986 274 ntBASIC1.19□□□□□ -2.22
Cpsf1Q9EPU4 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
Cpsf1Q9EPU4 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Cpsf1Q9EPU4 AC124524.1-201ENSMUST00000225833 181 ntBASIC1.19□□□□□ -2.22
Cpsf1Q9EPU4 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.19□□□□□ -2.22
Cpsf1Q9EPU4 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.19□□□□□ -2.22
Cpsf1Q9EPU4 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Cpsf1Q9EPU4 Gm5596-201ENSMUST00000207988 2421 ntBASIC1.19□□□□□ -2.22
Cpsf1Q9EPU4 Gm13676-201ENSMUST00000122185 591 ntBASIC1.18□□□□□ -2.22
Cpsf1Q9EPU4 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Cpsf1Q9EPU4 Gm24777-201ENSMUST00000157644 107 ntBASIC1.18□□□□□ -2.22
Cpsf1Q9EPU4 Gm7897-201ENSMUST00000193981 554 ntBASIC1.18□□□□□ -2.22
Cpsf1Q9EPU4 Gm44182-201ENSMUST00000204052 115 ntBASIC1.18□□□□□ -2.22
Cpsf1Q9EPU4 Gm11284-201ENSMUST00000121910 1887 ntBASIC1.18□□□□□ -2.22
Cpsf1Q9EPU4 Gm24049-201ENSMUST00000102409 100 ntBASIC1.17□□□□□ -2.22
Cpsf1Q9EPU4 Gm2003-201ENSMUST00000118537 636 ntBASIC1.17□□□□□ -2.22
Cpsf1Q9EPU4 Gm13577-201ENSMUST00000121365 205 ntBASIC1.17□□□□□ -2.22
Cpsf1Q9EPU4 Gm44585-201ENSMUST00000207150 607 ntBASIC1.17□□□□□ -2.22
Cpsf1Q9EPU4 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Cpsf1Q9EPU4 Mir221-201ENSMUST00000083488 95 ntBASIC1.17□□□□□ -2.22
Cpsf1Q9EPU4 Gm24445-201ENSMUST00000083981 107 ntBASIC1.17□□□□□ -2.22
Cpsf1Q9EPU4 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Cpsf1Q9EPU4 Mir19b-1-201ENSMUST00000102301 87 ntBASIC1.16□□□□□ -2.22
Cpsf1Q9EPU4 Gm11483-201ENSMUST00000119839 247 ntBASIC1.16□□□□□ -2.22
Cpsf1Q9EPU4 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.16□□□□□ -2.22
Cpsf1Q9EPU4 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.16□□□□□ -2.22
Cpsf1Q9EPU4 Mir3109-201ENSMUST00000175301 88 ntBASIC1.16□□□□□ -2.22
Cpsf1Q9EPU4 Gm33354-201ENSMUST00000195448 906 ntBASIC1.16□□□□□ -2.22
Cpsf1Q9EPU4 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.16□□□□□ -2.22
Cpsf1Q9EPU4 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC1.16□□□□□ -2.22
Cpsf1Q9EPU4 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC1.16□□□□□ -2.22
Cpsf1Q9EPU4 Gm14442-201ENSMUST00000119690 1736 ntBASIC1.16□□□□□ -2.22
Cpsf1Q9EPU4 Gm24126-201ENSMUST00000104111 106 ntBASIC1.15□□□□□ -2.22
Cpsf1Q9EPU4 Gm23120-201ENSMUST00000157654 287 ntBASIC1.15□□□□□ -2.22
Cpsf1Q9EPU4 Gm22389-201ENSMUST00000158193 301 ntBASIC1.15□□□□□ -2.22
Cpsf1Q9EPU4 Gm26358-201ENSMUST00000158215 97 ntBASIC1.15□□□□□ -2.22
Cpsf1Q9EPU4 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.15□□□□□ -2.22
Cpsf1Q9EPU4 Mir7079-201ENSMUST00000184697 69 ntBASIC1.15□□□□□ -2.22
Cpsf1Q9EPU4 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC1.15□□□□□ -2.22
Cpsf1Q9EPU4 Gm19202-201ENSMUST00000198096 808 ntBASIC1.15□□□□□ -2.22
Cpsf1Q9EPU4 Gm18598-201ENSMUST00000207724 597 ntBASIC1.15□□□□□ -2.22
Cpsf1Q9EPU4 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.15□□□□□ -2.22
Cpsf1Q9EPU4 Gm23735-201ENSMUST00000082551 134 ntBASIC1.15□□□□□ -2.22
Cpsf1Q9EPU4 Gm6954-201ENSMUST00000117416 225 ntBASIC1.15□□□□□ -2.23
Cpsf1Q9EPU4 Gm11572-201ENSMUST00000119164 120 ntBASIC1.15□□□□□ -2.23
Cpsf1Q9EPU4 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Cpsf1Q9EPU4 Gm22944-201ENSMUST00000158662 133 ntBASIC1.15□□□□□ -2.23
Cpsf1Q9EPU4 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.15□□□□□ -2.23
Cpsf1Q9EPU4 Gm16289-201ENSMUST00000162079 183 ntBASIC1.15□□□□□ -2.23
Cpsf1Q9EPU4 Gm18354-201ENSMUST00000173515 1068 ntBASIC1.15□□□□□ -2.23
Cpsf1Q9EPU4 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC1.15□□□□□ -2.23
Cpsf1Q9EPU4 Mir6238-201ENSMUST00000184140 129 ntBASIC1.15□□□□□ -2.23
Cpsf1Q9EPU4 Gm37213-201ENSMUST00000193077 586 ntBASIC1.15□□□□□ -2.23
Cpsf1Q9EPU4 Gm45386-201ENSMUST00000210194 218 ntBASIC1.15□□□□□ -2.23
Cpsf1Q9EPU4 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.15□□□□□ -2.23
Cpsf1Q9EPU4 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.15□□□□□ -2.23
Cpsf1Q9EPU4 Gm23245-201ENSMUST00000083370 135 ntBASIC1.15□□□□□ -2.23
Cpsf1Q9EPU4 Gm12137-201ENSMUST00000119565 346 ntBASIC1.14□□□□□ -2.23
Cpsf1Q9EPU4 Gm13239-201ENSMUST00000119920 637 ntBASIC1.14□□□□□ -2.23
Cpsf1Q9EPU4 Gm12872-201ENSMUST00000121835 320 ntBASIC1.14□□□□□ -2.23
Cpsf1Q9EPU4 Gm23429-201ENSMUST00000122486 149 ntBASIC1.14□□□□□ -2.23
Cpsf1Q9EPU4 Gm23137-201ENSMUST00000157559 107 ntBASIC1.14□□□□□ -2.23
Cpsf1Q9EPU4 Gm22425-201ENSMUST00000158532 138 ntBASIC1.14□□□□□ -2.23
Cpsf1Q9EPU4 Gm9402-201ENSMUST00000196849 388 ntBASIC1.14□□□□□ -2.23
Cpsf1Q9EPU4 Gm43090-201ENSMUST00000202459 314 ntBASIC1.14□□□□□ -2.23
Cpsf1Q9EPU4 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.14□□□□□ -2.23
Cpsf1Q9EPU4 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 182.5 ms