Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm24264-201ENSMUST00000179835 94 ntBASIC2.1□□□□□ -2.07
Cdc40Q9DC48 Gm25939-201ENSMUST00000179876 191 ntBASIC2.1□□□□□ -2.07
Cdc40Q9DC48 Gm27959-201ENSMUST00000185172 111 ntBASIC2.1□□□□□ -2.07
Cdc40Q9DC48 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Cdc40Q9DC48 Gm19193-201ENSMUST00000190263 590 ntBASIC2.1□□□□□ -2.07
Cdc40Q9DC48 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.1□□□□□ -2.07
Cdc40Q9DC48 Mir3069-201ENSMUST00000198802 65 ntBASIC2.1□□□□□ -2.07
Cdc40Q9DC48 Gm43026-201ENSMUST00000202972 325 ntBASIC2.1□□□□□ -2.07
Cdc40Q9DC48 Gm9377-201ENSMUST00000207227 623 ntBASIC2.1□□□□□ -2.07
Cdc40Q9DC48 AL929265.1-201ENSMUST00000213427 125 ntBASIC2.1□□□□□ -2.07
Cdc40Q9DC48 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
Cdc40Q9DC48 AC153646.1-201ENSMUST00000223229 1279 ntBASIC2.1□□□□□ -2.07
Cdc40Q9DC48 AC154506.3-201ENSMUST00000225417 213 ntBASIC2.1□□□□□ -2.07
Cdc40Q9DC48 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.1□□□□□ -2.07
Cdc40Q9DC48 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.1□□□□□ -2.07
Cdc40Q9DC48 Gm22061-201ENSMUST00000082557 107 ntBASIC2.1□□□□□ -2.07
Cdc40Q9DC48 Gm23444-201ENSMUST00000082922 191 ntBASIC2.1□□□□□ -2.07
Cdc40Q9DC48 Gm22866-201ENSMUST00000083947 177 ntBASIC2.1□□□□□ -2.07
Cdc40Q9DC48 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Cdc40Q9DC48 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Cdc40Q9DC48 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.1□□□□□ -2.07
Cdc40Q9DC48 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Cdc40Q9DC48 Gm25088-201ENSMUST00000101803 79 ntBASIC2.09□□□□□ -2.07
Cdc40Q9DC48 Gm24908-201ENSMUST00000157294 127 ntBASIC2.09□□□□□ -2.07
Cdc40Q9DC48 Gm22817-201ENSMUST00000157448 356 ntBASIC2.09□□□□□ -2.07
Cdc40Q9DC48 Gm23777-201ENSMUST00000158994 259 ntBASIC2.09□□□□□ -2.07
Cdc40Q9DC48 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Cdc40Q9DC48 Gm20915-201ENSMUST00000191575 663 ntBASIC2.09□□□□□ -2.07
Cdc40Q9DC48 Gm43402-201ENSMUST00000197159 159 ntBASIC2.09□□□□□ -2.07
Cdc40Q9DC48 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.09□□□□□ -2.07
Cdc40Q9DC48 Gm43955-201ENSMUST00000204332 142 ntBASIC2.09□□□□□ -2.07
Cdc40Q9DC48 Gm10297-201ENSMUST00000207136 651 ntBASIC2.09□□□□□ -2.07
Cdc40Q9DC48 Gm2676-201ENSMUST00000207279 606 ntBASIC2.09□□□□□ -2.07
Cdc40Q9DC48 Gm18000-201ENSMUST00000212153 800 ntBASIC2.09□□□□□ -2.07
Cdc40Q9DC48 Gm18488-201ENSMUST00000215082 364 ntBASIC2.09□□□□□ -2.07
Cdc40Q9DC48 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Cdc40Q9DC48 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
Cdc40Q9DC48 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.09□□□□□ -2.08
Cdc40Q9DC48 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm14007-201ENSMUST00000118288 210 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm8217-201ENSMUST00000119136 465 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm22818-201ENSMUST00000157446 104 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm24716-201ENSMUST00000157524 104 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm24769-201ENSMUST00000158506 129 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm20794-201ENSMUST00000177626 628 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Mir6382-201ENSMUST00000184055 110 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm27753-201ENSMUST00000184742 203 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm28356-202ENSMUST00000187566 858 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm20885-201ENSMUST00000190192 654 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm28951-201ENSMUST00000190742 313 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm36866-201ENSMUST00000193343 657 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm32033-201ENSMUST00000193483 339 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm36047-201ENSMUST00000193659 657 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm20857-201ENSMUST00000194766 657 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm20858-201ENSMUST00000195459 657 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm44324-201ENSMUST00000198517 135 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm44254-201ENSMUST00000204184 322 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm44050-201ENSMUST00000204263 527 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm8940-201ENSMUST00000212585 219 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm43924-201ENSMUST00000204851 1736 ntBASIC2.08□□□□□ -2.08
Cdc40Q9DC48 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Cdc40Q9DC48 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm24049-201ENSMUST00000102409 100 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm13331-201ENSMUST00000117500 448 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm14868-201ENSMUST00000117840 216 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm12656-201ENSMUST00000118149 577 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm13876-201ENSMUST00000118451 261 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm12096-201ENSMUST00000121149 829 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm24937-201ENSMUST00000122597 134 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm23538-201ENSMUST00000157535 101 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm22554-201ENSMUST00000157798 147 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm15900-201ENSMUST00000161584 342 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm17054-201ENSMUST00000169811 259 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm4076-201ENSMUST00000179230 965 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm28666-201ENSMUST00000186649 274 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm37438-201ENSMUST00000192813 393 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm43171-201ENSMUST00000199882 291 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm44472-201ENSMUST00000204922 943 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 142.4 ms