Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm19457-201ENSMUST00000200995 448 ntBASIC2.12□□□□□ -2.07
Chmp4bQ9D8B3 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Chmp4bQ9D8B3 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Chmp4bQ9D8B3 Gm22683-201ENSMUST00000082854 137 ntBASIC2.12□□□□□ -2.07
Chmp4bQ9D8B3 Gm21286-201ENSMUST00000098035 545 ntBASIC2.12□□□□□ -2.07
Chmp4bQ9D8B3 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Chmp4bQ9D8B3 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.11□□□□□ -2.07
Chmp4bQ9D8B3 Gm26396-201ENSMUST00000104093 132 ntBASIC2.11□□□□□ -2.07
Chmp4bQ9D8B3 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.11□□□□□ -2.07
Chmp4bQ9D8B3 Mir669n-201ENSMUST00000158636 54 ntBASIC2.11□□□□□ -2.07
Chmp4bQ9D8B3 Gm22665-201ENSMUST00000158720 275 ntBASIC2.11□□□□□ -2.07
Chmp4bQ9D8B3 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.11□□□□□ -2.07
Chmp4bQ9D8B3 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Chmp4bQ9D8B3 Gm28755-201ENSMUST00000185773 199 ntBASIC2.11□□□□□ -2.07
Chmp4bQ9D8B3 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.11□□□□□ -2.07
Chmp4bQ9D8B3 Gm44754-201ENSMUST00000208155 400 ntBASIC2.11□□□□□ -2.07
Chmp4bQ9D8B3 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.11□□□□□ -2.07
Chmp4bQ9D8B3 Gm7214-201ENSMUST00000222428 272 ntBASIC2.11□□□□□ -2.07
Chmp4bQ9D8B3 Gm24406-201ENSMUST00000083026 128 ntBASIC2.11□□□□□ -2.07
Chmp4bQ9D8B3 Gm23727-201ENSMUST00000083352 164 ntBASIC2.11□□□□□ -2.07
Chmp4bQ9D8B3 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.11□□□□□ -2.07
Chmp4bQ9D8B3 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Chmp4bQ9D8B3 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Chmp4bQ9D8B3 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Chmp4bQ9D8B3 Mir758-201ENSMUST00000103260 81 ntBASIC2.1□□□□□ -2.07
Chmp4bQ9D8B3 Gm14945-201ENSMUST00000119556 1118 ntBASIC2.1□□□□□ -2.07
Chmp4bQ9D8B3 Gm25637-201ENSMUST00000157529 107 ntBASIC2.1□□□□□ -2.07
Chmp4bQ9D8B3 Gm7592-201ENSMUST00000160674 627 ntBASIC2.1□□□□□ -2.07
Chmp4bQ9D8B3 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC2.1□□□□□ -2.07
Chmp4bQ9D8B3 Gm19932-201ENSMUST00000177033 313 ntBASIC2.1□□□□□ -2.07
Chmp4bQ9D8B3 Gm26864-201ENSMUST00000181346 156 ntBASIC2.1□□□□□ -2.07
Chmp4bQ9D8B3 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Chmp4bQ9D8B3 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.1□□□□□ -2.07
Chmp4bQ9D8B3 Gm44585-201ENSMUST00000207150 607 ntBASIC2.1□□□□□ -2.07
Chmp4bQ9D8B3 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.1□□□□□ -2.07
Chmp4bQ9D8B3 Gm25788-201ENSMUST00000082721 131 ntBASIC2.1□□□□□ -2.07
Chmp4bQ9D8B3 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.09□□□□□ -2.07
Chmp4bQ9D8B3 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Chmp4bQ9D8B3 Gm20679-201ENSMUST00000177285 1402 ntBASIC2.09□□□□□ -2.07
Chmp4bQ9D8B3 Defa-ps1-201ENSMUST00000119062 282 ntBASIC2.09□□□□□ -2.07
Chmp4bQ9D8B3 Gm25279-201ENSMUST00000122608 133 ntBASIC2.09□□□□□ -2.07
Chmp4bQ9D8B3 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
Chmp4bQ9D8B3 Gm17162-201ENSMUST00000168538 473 ntBASIC2.09□□□□□ -2.07
Chmp4bQ9D8B3 Mir7679-201ENSMUST00000183379 63 ntBASIC2.09□□□□□ -2.07
Chmp4bQ9D8B3 Mir7241-201ENSMUST00000184532 64 ntBASIC2.09□□□□□ -2.07
Chmp4bQ9D8B3 Snord43-201ENSMUST00000199549 108 ntBASIC2.09□□□□□ -2.07
Chmp4bQ9D8B3 Gm43659-201ENSMUST00000200894 628 ntBASIC2.09□□□□□ -2.07
Chmp4bQ9D8B3 Gm34701-202ENSMUST00000204685 360 ntBASIC2.09□□□□□ -2.07
Chmp4bQ9D8B3 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.09□□□□□ -2.07
Chmp4bQ9D8B3 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
Chmp4bQ9D8B3 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Chmp4bQ9D8B3 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.08□□□□□ -2.08
Chmp4bQ9D8B3 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Chmp4bQ9D8B3 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.08□□□□□ -2.08
Chmp4bQ9D8B3 Gm11430-201ENSMUST00000121317 217 ntBASIC2.08□□□□□ -2.08
Chmp4bQ9D8B3 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC2.08□□□□□ -2.08
Chmp4bQ9D8B3 Gm17119-201ENSMUST00000163943 280 ntBASIC2.08□□□□□ -2.08
Chmp4bQ9D8B3 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.08□□□□□ -2.08
Chmp4bQ9D8B3 Mir6352-201ENSMUST00000184495 116 ntBASIC2.08□□□□□ -2.08
Chmp4bQ9D8B3 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.08□□□□□ -2.08
Chmp4bQ9D8B3 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.08□□□□□ -2.08
Chmp4bQ9D8B3 AC172027.1-201ENSMUST00000217659 337 ntBASIC2.08□□□□□ -2.08
Chmp4bQ9D8B3 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.08□□□□□ -2.08
Chmp4bQ9D8B3 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.08□□□□□ -2.08
Chmp4bQ9D8B3 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.08□□□□□ -2.08
Chmp4bQ9D8B3 Gm22740-201ENSMUST00000083439 109 ntBASIC2.08□□□□□ -2.08
Chmp4bQ9D8B3 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Chmp4bQ9D8B3 Gm23691-201ENSMUST00000101878 107 ntBASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Gm13714-201ENSMUST00000117313 221 ntBASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Gm14600-201ENSMUST00000121032 630 ntBASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Gm23043-201ENSMUST00000157890 109 ntBASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Gm22803-201ENSMUST00000158049 283 ntBASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Snord11-201ENSMUST00000158468 84 ntBASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Gm28383-201ENSMUST00000187563 139 ntBASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Gm29262-201ENSMUST00000190084 196 ntBASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Gm43007-201ENSMUST00000197618 291 ntBASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Gm42672-201ENSMUST00000197821 352 ntBASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Gm43512-201ENSMUST00000198495 176 ntBASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Gm43578-201ENSMUST00000201250 459 ntBASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Gm19140-201ENSMUST00000209790 421 ntBASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 AC101945.1-201ENSMUST00000226734 466 ntBASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Chmp4bQ9D8B3 Gm13343-201ENSMUST00000116474 105 ntBASIC2.06□□□□□ -2.08
Chmp4bQ9D8B3 Gm12881-201ENSMUST00000121191 203 ntBASIC2.06□□□□□ -2.08
Chmp4bQ9D8B3 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.06□□□□□ -2.08
Chmp4bQ9D8B3 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.06□□□□□ -2.08
Chmp4bQ9D8B3 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Chmp4bQ9D8B3 Gm26195-201ENSMUST00000175035 101 ntBASIC2.06□□□□□ -2.08
Chmp4bQ9D8B3 Mir8106-201ENSMUST00000184520 139 ntBASIC2.06□□□□□ -2.08
Chmp4bQ9D8B3 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC2.06□□□□□ -2.08
Chmp4bQ9D8B3 AC115357.1-201ENSMUST00000227575 466 ntBASIC2.06□□□□□ -2.08
Chmp4bQ9D8B3 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Chmp4bQ9D8B3 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Chmp4bQ9D8B3 Gm11854-201ENSMUST00000117839 446 ntBASIC2.05□□□□□ -2.08
Chmp4bQ9D8B3 Gm15312-201ENSMUST00000118827 271 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms