Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm20648-201ENSMUST00000175815 328 ntBASIC1.88□□□□□ -2.11
Ccdc3Q9D6Y1 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC1.88□□□□□ -2.11
Ccdc3Q9D6Y1 Gm28745-201ENSMUST00000190069 305 ntBASIC1.88□□□□□ -2.11
Ccdc3Q9D6Y1 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.88□□□□□ -2.11
Ccdc3Q9D6Y1 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Ccdc3Q9D6Y1 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.88□□□□□ -2.11
Ccdc3Q9D6Y1 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Ccdc3Q9D6Y1 Gm25402-201ENSMUST00000082966 131 ntBASIC1.88□□□□□ -2.11
Ccdc3Q9D6Y1 Mir93-201ENSMUST00000083593 88 ntBASIC1.88□□□□□ -2.11
Ccdc3Q9D6Y1 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Gm17969-201ENSMUST00000185706 2557 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Gm13343-201ENSMUST00000116474 105 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Gm14594-201ENSMUST00000118052 537 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Gm14590-201ENSMUST00000118934 537 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Gm14945-201ENSMUST00000119556 1118 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Gm22037-201ENSMUST00000157280 296 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Gm3025-201ENSMUST00000163454 489 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Gm2878-201ENSMUST00000170173 486 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Gm20679-201ENSMUST00000177285 1402 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Gm14596-201ENSMUST00000180268 537 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Gm14595-201ENSMUST00000180335 537 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Mir6352-201ENSMUST00000184495 116 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Mir3087-201ENSMUST00000199405 56 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 AC154603.1-201ENSMUST00000224355 313 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 AC147633.1-201ENSMUST00000225134 259 ntBASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
Ccdc3Q9D6Y1 Gm14657-201ENSMUST00000117461 302 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Gm14823-201ENSMUST00000117698 238 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Gm13876-201ENSMUST00000118451 261 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Gm12235-201ENSMUST00000118596 170 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Gm11785-201ENSMUST00000120165 601 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Gm14898-201ENSMUST00000120202 645 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Gm14402-201ENSMUST00000122217 508 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Gm38281-201ENSMUST00000192301 315 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Gm8041-201ENSMUST00000199755 616 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Igkv1-136-201ENSMUST00000200635 297 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Gm44938-201ENSMUST00000208614 427 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 AL929285.1-201ENSMUST00000215522 229 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 CT030238.4-201ENSMUST00000228579 801 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Gm22683-201ENSMUST00000082854 137 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Gm25124-201ENSMUST00000083345 164 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Gm25411-201ENSMUST00000083760 151 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Gm7869-201ENSMUST00000121457 1322 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Gm43216-201ENSMUST00000196295 1333 ntBASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Ccdc3Q9D6Y1 Gm14670-201ENSMUST00000117327 337 ntBASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 Gm23387-201ENSMUST00000158586 107 ntBASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 Gm17038-201ENSMUST00000166586 494 ntBASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 Gm24304-201ENSMUST00000177635 107 ntBASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 Gm24100-201ENSMUST00000178592 79 ntBASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 Gm24638-201ENSMUST00000179807 132 ntBASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 Gm9892-201ENSMUST00000182415 992 ntBASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 Gm27761-201ENSMUST00000184091 131 ntBASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 Gm29657-201ENSMUST00000189807 342 ntBASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 Gm19326-201ENSMUST00000219818 326 ntBASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 AC121114.1-201ENSMUST00000228522 570 ntBASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.85□□□□□ -2.11
Ccdc3Q9D6Y1 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm15183-201ENSMUST00000118933 348 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm15497-201ENSMUST00000119137 551 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm15760-201ENSMUST00000119553 283 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm11438-201ENSMUST00000121582 189 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm26024-201ENSMUST00000158657 322 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm7592-201ENSMUST00000160674 627 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm21758-201ENSMUST00000179336 819 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm26189-201ENSMUST00000179879 107 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm27428-201ENSMUST00000184289 110 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Mir6950-201ENSMUST00000184438 73 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm29647-201ENSMUST00000188795 666 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm20832-201ENSMUST00000189076 665 ntBASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Ccdc3Q9D6Y1 Gm28241-201ENSMUST00000190916 235 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms