Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm26145-201ENSMUST00000104476 127 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm23987-201ENSMUST00000117039 129 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm15714-201ENSMUST00000117168 250 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm15783-201ENSMUST00000117521 633 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm15896-201ENSMUST00000118045 440 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm14810-201ENSMUST00000121628 486 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Mir1942-201ENSMUST00000157274 63 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm25427-201ENSMUST00000157605 103 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm23775-201ENSMUST00000158991 249 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm7925-201ENSMUST00000166690 401 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Igkv12-49-201ENSMUST00000197714 278 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm9712-201ENSMUST00000210842 311 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 mt-Tr-201ENSMUST00000082412 68 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm10212-201ENSMUST00000087884 324 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm26256-201ENSMUST00000122499 186 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm23602-201ENSMUST00000157258 132 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm22034-201ENSMUST00000157283 134 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm23713-201ENSMUST00000157353 70 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm23592-201ENSMUST00000157859 117 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm24192-201ENSMUST00000157978 145 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm24857-201ENSMUST00000158061 310 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm22615-201ENSMUST00000158102 70 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm17187-201ENSMUST00000164622 410 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm21816-201ENSMUST00000179255 360 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm26180-201ENSMUST00000179942 107 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm37361-201ENSMUST00000194345 132 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm23370-202ENSMUST00000197008 129 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm2059-201ENSMUST00000212025 287 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm5023-201ENSMUST00000217442 587 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 AC164304.1-201ENSMUST00000226920 272 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm25698-201ENSMUST00000082897 107 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Ddx56Q9D0R4 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Gm14624-201ENSMUST00000117746 192 ntBASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Gm12155-201ENSMUST00000121267 160 ntBASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Gm24724-201ENSMUST00000158230 107 ntBASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Gm23933-201ENSMUST00000178405 79 ntBASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Gm37128-201ENSMUST00000192599 232 ntBASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Ighv2-8-201ENSMUST00000193935 262 ntBASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Gm10298-201ENSMUST00000074801 265 ntBASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Gm5265-201ENSMUST00000076828 342 ntBASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Gm25079-201ENSMUST00000082529 203 ntBASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Snora70-201ENSMUST00000083047 137 ntBASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Gm25207-201ENSMUST00000093745 107 ntBASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ddx56Q9D0R4 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Ddx56Q9D0R4 Gm22658-201ENSMUST00000104196 155 ntBASIC3.67□□□□□ -1.82
Ddx56Q9D0R4 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ddx56Q9D0R4 Gm12722-201ENSMUST00000118507 493 ntBASIC3.67□□□□□ -1.82
Ddx56Q9D0R4 Gm25982-201ENSMUST00000157920 101 ntBASIC3.67□□□□□ -1.82
Ddx56Q9D0R4 Gm27510-201ENSMUST00000158214 64 ntBASIC3.67□□□□□ -1.82
Ddx56Q9D0R4 Gm28030-201ENSMUST00000184987 138 ntBASIC3.67□□□□□ -1.82
Ddx56Q9D0R4 Mir7028-201ENSMUST00000185016 64 ntBASIC3.67□□□□□ -1.82
Ddx56Q9D0R4 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.67□□□□□ -1.82
Ddx56Q9D0R4 Gm28838-201ENSMUST00000186338 315 ntBASIC3.67□□□□□ -1.82
Ddx56Q9D0R4 Gm29635-201ENSMUST00000187221 315 ntBASIC3.67□□□□□ -1.82
Ddx56Q9D0R4 Gm29026-201ENSMUST00000187787 315 ntBASIC3.67□□□□□ -1.82
Ddx56Q9D0R4 Gm28661-201ENSMUST00000188231 681 ntBASIC3.67□□□□□ -1.82
Ddx56Q9D0R4 Gm28797-201ENSMUST00000188543 315 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms