Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm22023-201ENSMUST00000104354 130 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm13331-201ENSMUST00000117500 448 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm11356-201ENSMUST00000118974 192 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm15106-201ENSMUST00000119691 821 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm5287-201ENSMUST00000120666 598 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm14629-201ENSMUST00000122428 144 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm26414-201ENSMUST00000157674 269 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm17072-201ENSMUST00000166673 658 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm29134-201ENSMUST00000186579 126 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm7654-201ENSMUST00000186738 683 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm28337-201ENSMUST00000190425 666 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm37281-201ENSMUST00000192412 439 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm36866-201ENSMUST00000193343 657 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm36047-201ENSMUST00000193659 657 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm20857-201ENSMUST00000194766 657 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm7871-201ENSMUST00000195346 618 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm20858-201ENSMUST00000195459 657 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm38167-201ENSMUST00000195704 1178 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Gm22247-201ENSMUST00000082476 131 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Mir208a-201ENSMUST00000083498 83 ntBASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Ddx28Q9CWT6 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Snord14c-201ENSMUST00000101927 86 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Gm14013-201ENSMUST00000119006 270 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Gm11420-201ENSMUST00000120047 402 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Gm14841-201ENSMUST00000121067 758 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Gm24839-201ENSMUST00000122602 107 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Gm22668-201ENSMUST00000158716 260 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Gm22136-201ENSMUST00000158751 268 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Gm15914-201ENSMUST00000161922 309 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Gm18588-201ENSMUST00000177308 492 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Gm37417-201ENSMUST00000195257 454 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Gm36953-201ENSMUST00000195295 268 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Gm43083-201ENSMUST00000199594 476 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Gm19252-201ENSMUST00000204705 305 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Gm7948-201ENSMUST00000212607 844 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Gm19326-201ENSMUST00000219818 326 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ddx28Q9CWT6 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Ddx28Q9CWT6 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Ddx28Q9CWT6 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Ddx28Q9CWT6 Gm12255-201ENSMUST00000117184 284 ntBASIC2.76□□□□□ -1.97
Ddx28Q9CWT6 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.76□□□□□ -1.97
Ddx28Q9CWT6 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.76□□□□□ -1.97
Ddx28Q9CWT6 Gm24780-201ENSMUST00000157635 143 ntBASIC2.76□□□□□ -1.97
Ddx28Q9CWT6 Gm24730-201ENSMUST00000158228 117 ntBASIC2.76□□□□□ -1.97
Ddx28Q9CWT6 Gm8114-201ENSMUST00000172225 484 ntBASIC2.76□□□□□ -1.97
Ddx28Q9CWT6 Gm20794-201ENSMUST00000177626 628 ntBASIC2.76□□□□□ -1.97
Ddx28Q9CWT6 Gm21744-201ENSMUST00000178403 662 ntBASIC2.76□□□□□ -1.97
Ddx28Q9CWT6 Gm21171-201ENSMUST00000180048 673 ntBASIC2.76□□□□□ -1.97
Ddx28Q9CWT6 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Ddx28Q9CWT6 Mir7578-201ENSMUST00000183455 82 ntBASIC2.76□□□□□ -1.97
Ddx28Q9CWT6 Gm28700-201ENSMUST00000187614 579 ntBASIC2.76□□□□□ -1.97
Ddx28Q9CWT6 Gm28843-201ENSMUST00000189198 678 ntBASIC2.76□□□□□ -1.97
Ddx28Q9CWT6 Gm29546-201ENSMUST00000191171 678 ntBASIC2.76□□□□□ -1.97
Ddx28Q9CWT6 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms