Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Gm25863-201ENSMUST00000158249 329 ntBASIC2.78□□□□□ -1.96
Smc1aQ9CU62 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Gm18416-201ENSMUST00000175635 1003 ntBASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Gm25451-201ENSMUST00000177832 121 ntBASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Gm23269-201ENSMUST00000178701 107 ntBASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Gm43114-201ENSMUST00000198298 343 ntBASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Gm31230-201ENSMUST00000199725 785 ntBASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.78□□□□□ -1.96
Smc1aQ9CU62 AC101677.1-201ENSMUST00000218590 158 ntBASIC2.78□□□□□ -1.96
Smc1aQ9CU62 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Gm22974-201ENSMUST00000083301 103 ntBASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Gm24698-201ENSMUST00000083883 130 ntBASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
Smc1aQ9CU62 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Gm14292-201ENSMUST00000118761 456 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Gm15106-201ENSMUST00000119691 821 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Gm13913-201ENSMUST00000121126 260 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Gm24910-201ENSMUST00000157289 272 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Gm22098-201ENSMUST00000157930 85 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Gm22534-201ENSMUST00000158173 104 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Gm23025-201ENSMUST00000158769 111 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Smc1aQ9CU62 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Gm18396-201ENSMUST00000177095 361 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Gm24137-201ENSMUST00000180055 79 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Gm22391-201ENSMUST00000180356 79 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Mir6382-201ENSMUST00000184055 110 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Gm36966-201ENSMUST00000192217 413 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Gm43402-201ENSMUST00000197159 159 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 AC162931.1-201ENSMUST00000214184 267 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Gm3442-201ENSMUST00000216808 710 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 AC111046.1-201ENSMUST00000217715 412 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Smc1aQ9CU62 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.77□□□□□ -1.97
Smc1aQ9CU62 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Smc1aQ9CU62 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Gm25563-201ENSMUST00000104603 74 ntBASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Gm23803-201ENSMUST00000104610 132 ntBASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Gm12006-201ENSMUST00000120786 403 ntBASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Gm22227-201ENSMUST00000157356 259 ntBASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Gm22611-201ENSMUST00000158288 150 ntBASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Smc1aQ9CU62 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Gm25642-201ENSMUST00000175137 66 ntBASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Gm22584-201ENSMUST00000177935 92 ntBASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Gm27817-201ENSMUST00000184302 233 ntBASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Gm43722-201ENSMUST00000196054 124 ntBASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Gm44990-201ENSMUST00000203922 217 ntBASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Gm45387-201ENSMUST00000209792 632 ntBASIC2.76□□□□□ -1.97
Smc1aQ9CU62 AC154484.1-201ENSMUST00000227311 771 ntBASIC2.76□□□□□ -1.97
Smc1aQ9CU62 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Gm23727-201ENSMUST00000083352 164 ntBASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
Smc1aQ9CU62 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.76□□□□□ -1.97
Smc1aQ9CU62 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Gm25088-201ENSMUST00000101803 79 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Gm22591-201ENSMUST00000104243 106 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Gm24911-201ENSMUST00000157292 136 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Gm25365-201ENSMUST00000158852 121 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Gm23476-201ENSMUST00000158881 274 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Mir3964-201ENSMUST00000174898 74 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Gm27220-201ENSMUST00000183453 262 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Mir8090-201ENSMUST00000185078 136 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Gm20058-201ENSMUST00000186939 284 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Gm29335-201ENSMUST00000188361 459 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Gm17771-201ENSMUST00000194477 1147 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Gm44961-201ENSMUST00000207450 196 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Gm45101-201ENSMUST00000208327 232 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Gm45445-201ENSMUST00000209586 232 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Gm18000-201ENSMUST00000212153 800 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Gm19118-201ENSMUST00000222554 98 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Mir19a-201ENSMUST00000083482 82 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.75□□□□□ -1.97
Smc1aQ9CU62 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Smc1aQ9CU62 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Smc1aQ9CU62 Gm24670-201ENSMUST00000104154 132 ntBASIC2.74□□□□□ -1.97
Smc1aQ9CU62 Gm13880-201ENSMUST00000118421 474 ntBASIC2.74□□□□□ -1.97
Smc1aQ9CU62 Gm14835-201ENSMUST00000119039 315 ntBASIC2.74□□□□□ -1.97
Smc1aQ9CU62 Gm12096-201ENSMUST00000121149 829 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms