Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Snora36b-201ENSMUST00000104383 132 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm14579-201ENSMUST00000117068 283 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm23600-201ENSMUST00000157260 71 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm22597-201ENSMUST00000157602 80 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm22483-201ENSMUST00000157986 274 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm28282-201ENSMUST00000186072 186 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Trbv6-201ENSMUST00000193743 276 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm38238-201ENSMUST00000194334 346 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm43550-201ENSMUST00000200597 303 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm42475-201ENSMUST00000201212 295 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm44990-201ENSMUST00000203922 217 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm45678-201ENSMUST00000210509 295 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm10298-201ENSMUST00000074801 265 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm26446-201ENSMUST00000082455 103 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm23042-201ENSMUST00000083866 101 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.78□□□□□ -1.96
Ccdc43Q9CR29 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.78□□□□□ -1.97
Ccdc43Q9CR29 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Mir682-201ENSMUST00000102281 96 ntBASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Gm22591-201ENSMUST00000104243 106 ntBASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Gm8114-201ENSMUST00000172225 484 ntBASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Gm11395-201ENSMUST00000181011 499 ntBASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Gm38280-201ENSMUST00000192610 158 ntBASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Gm43669-201ENSMUST00000198229 436 ntBASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Gm32222-201ENSMUST00000203296 298 ntBASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Gm26166-201ENSMUST00000083788 107 ntBASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
Ccdc43Q9CR29 Gm23175-201ENSMUST00000104371 132 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm26247-201ENSMUST00000116702 91 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm24627-201ENSMUST00000122764 138 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm23956-201ENSMUST00000157211 119 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm23223-201ENSMUST00000158119 127 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm23025-201ENSMUST00000158769 111 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm17065-201ENSMUST00000165245 239 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm9593-201ENSMUST00000166034 469 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm24304-201ENSMUST00000177635 107 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm28825-201ENSMUST00000186233 238 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm28474-201ENSMUST00000188501 315 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm23370-202ENSMUST00000197008 129 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 AC156560.1-201ENSMUST00000221425 256 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.76□□□□□ -1.97
Ccdc43Q9CR29 Gm12765-201ENSMUST00000117273 615 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Gm9043-201ENSMUST00000119677 314 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Gm22038-201ENSMUST00000157277 242 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Gm22382-201ENSMUST00000158185 130 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Gm24771-201ENSMUST00000158508 137 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Gm24056-201ENSMUST00000158617 146 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Gm18692-201ENSMUST00000193047 511 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Gm37599-201ENSMUST00000193067 489 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Gm42739-201ENSMUST00000200687 226 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Gm43264-201ENSMUST00000202284 325 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Gm44526-201ENSMUST00000204664 121 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Gm44519-201ENSMUST00000206486 122 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Gm17890-201ENSMUST00000221419 757 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.75□□□□□ -1.97
Ccdc43Q9CR29 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms