Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Mir6996-201ENSMUST00000183922 61 ntBASIC4.63□□□□□ -1.67
Trim11Q99PQ2 Gm9402-201ENSMUST00000196849 388 ntBASIC4.63□□□□□ -1.67
Trim11Q99PQ2 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.63□□□□□ -1.67
Trim11Q99PQ2 AC165293.1-201ENSMUST00000219669 329 ntBASIC4.63□□□□□ -1.67
Trim11Q99PQ2 CT010449.1-201ENSMUST00000220624 153 ntBASIC4.63□□□□□ -1.67
Trim11Q99PQ2 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.63□□□□□ -1.67
Trim11Q99PQ2 AC121942.2-201ENSMUST00000223824 600 ntBASIC4.63□□□□□ -1.67
Trim11Q99PQ2 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim11Q99PQ2 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.63□□□□□ -1.67
Trim11Q99PQ2 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim11Q99PQ2 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim11Q99PQ2 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.63□□□□□ -1.67
Trim11Q99PQ2 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.62□□□□□ -1.67
Trim11Q99PQ2 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Snora64-201ENSMUST00000104521 134 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Gm11367-201ENSMUST00000117802 120 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 n-R5s192-201ENSMUST00000122577 119 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Gm23044-201ENSMUST00000157891 100 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Gm26028-201ENSMUST00000158660 294 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Gm37670-201ENSMUST00000193622 229 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Gm37796-201ENSMUST00000195327 134 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Gm7468-201ENSMUST00000203900 652 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Gm44520-201ENSMUST00000205447 802 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Gm30674-201ENSMUST00000214523 392 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Gm46998-201ENSMUST00000221444 330 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Mir32-201ENSMUST00000083610 70 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.62□□□□□ -1.67
Trim11Q99PQ2 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm24318-201ENSMUST00000104490 131 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm12640-201ENSMUST00000120097 310 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm25177-201ENSMUST00000122634 117 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm25054-201ENSMUST00000157370 97 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm26036-201ENSMUST00000158149 144 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm25716-201ENSMUST00000158628 104 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm20450-201ENSMUST00000173652 147 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm18520-201ENSMUST00000174783 658 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.61□□□□□ -1.67
Trim11Q99PQ2 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm6651-201ENSMUST00000189471 271 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm4644-201ENSMUST00000197587 400 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm44324-201ENSMUST00000198517 135 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm42526-201ENSMUST00000198956 393 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm45317-201ENSMUST00000210385 223 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.61□□□□□ -1.67
Trim11Q99PQ2 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Trim11Q99PQ2 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trim11Q99PQ2 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Trim11Q99PQ2 Gm14914-201ENSMUST00000117576 2031 ntBASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Gm23319-201ENSMUST00000104467 131 ntBASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Gm15263-201ENSMUST00000121556 642 ntBASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Gm14649-201ENSMUST00000121814 324 ntBASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Gm11204-201ENSMUST00000122438 147 ntBASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Gm23642-201ENSMUST00000157858 258 ntBASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Gm23640-201ENSMUST00000157860 104 ntBASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Gm25935-201ENSMUST00000178746 107 ntBASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Gm27245-201ENSMUST00000184385 376 ntBASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Mir6391-201ENSMUST00000184391 104 ntBASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Trim11Q99PQ2 AC155715.1-201ENSMUST00000213575 463 ntBASIC4.6□□□□□ -1.67
Trim11Q99PQ2 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Gm25814-201ENSMUST00000082754 107 ntBASIC4.6□□□□□ -1.67
Trim11Q99PQ2 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms