Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm22936-201ENSMUST00000103955 126 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 Gm13873-201ENSMUST00000119208 427 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 Gm23277-201ENSMUST00000157914 136 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 Gm26362-201ENSMUST00000158865 315 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Lims1Q99JW4 Gm17100-201ENSMUST00000168963 272 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.7□□□□□ -1.82
Lims1Q99JW4 Gm24167-201ENSMUST00000177733 124 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 Gm24028-201ENSMUST00000178991 124 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 Gm24264-201ENSMUST00000179835 94 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 Gm27476-201ENSMUST00000183366 104 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 Gm29428-201ENSMUST00000190086 409 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Lims1Q99JW4 Gm43529-201ENSMUST00000199178 412 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Lims1Q99JW4 Gm46998-201ENSMUST00000221444 330 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Lims1Q99JW4 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 Gm25411-201ENSMUST00000083760 151 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lims1Q99JW4 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lims1Q99JW4 Gm8935-202ENSMUST00000105727 1959 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.7□□□□□ -1.82
Lims1Q99JW4 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Lims1Q99JW4 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Lims1Q99JW4 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC3.69□□□□□ -1.82
Lims1Q99JW4 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Lims1Q99JW4 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Lims1Q99JW4 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Lims1Q99JW4 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lims1Q99JW4 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lims1Q99JW4 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lims1Q99JW4 Gm13541-201ENSMUST00000119519 283 ntBASIC3.69□□□□□ -1.82
Lims1Q99JW4 Gm22204-201ENSMUST00000122654 327 ntBASIC3.69□□□□□ -1.82
Lims1Q99JW4 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.69□□□□□ -1.82
Lims1Q99JW4 Gm25664-201ENSMUST00000157697 107 ntBASIC3.69□□□□□ -1.82
Lims1Q99JW4 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.69□□□□□ -1.82
Lims1Q99JW4 Gm5329-201ENSMUST00000186898 463 ntBASIC3.69□□□□□ -1.82
Lims1Q99JW4 Gm19123-201ENSMUST00000190716 651 ntBASIC3.69□□□□□ -1.82
Lims1Q99JW4 Gm4644-201ENSMUST00000197587 400 ntBASIC3.69□□□□□ -1.82
Lims1Q99JW4 Gm32222-201ENSMUST00000203296 298 ntBASIC3.69□□□□□ -1.82
Lims1Q99JW4 Gm44650-201ENSMUST00000206929 194 ntBASIC3.69□□□□□ -1.82
Lims1Q99JW4 Gm5358-201ENSMUST00000212814 353 ntBASIC3.69□□□□□ -1.82
Lims1Q99JW4 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.69□□□□□ -1.82
Lims1Q99JW4 Mir181b-2-201ENSMUST00000083644 89 ntBASIC3.69□□□□□ -1.82
Lims1Q99JW4 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Lims1Q99JW4 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Lims1Q99JW4 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Lims1Q99JW4 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Lims1Q99JW4 Gm37625-201ENSMUST00000194969 4872 ntBASIC3.69□□□□□ -1.82
Lims1Q99JW4 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Gm14810-201ENSMUST00000121628 486 ntBASIC3.68□□□□□ -1.82
Lims1Q99JW4 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Gm24014-201ENSMUST00000157728 157 ntBASIC3.68□□□□□ -1.82
Lims1Q99JW4 Gm23209-201ENSMUST00000158667 110 ntBASIC3.68□□□□□ -1.82
Lims1Q99JW4 Mir6715-201ENSMUST00000184990 57 ntBASIC3.68□□□□□ -1.82
Lims1Q99JW4 Gm29429-201ENSMUST00000187071 121 ntBASIC3.68□□□□□ -1.82
Lims1Q99JW4 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.68□□□□□ -1.82
Lims1Q99JW4 Gm38332-201ENSMUST00000194189 147 ntBASIC3.68□□□□□ -1.82
Lims1Q99JW4 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.68□□□□□ -1.82
Lims1Q99JW4 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Lims1Q99JW4 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.68□□□□□ -1.82
Lims1Q99JW4 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.68□□□□□ -1.82
Lims1Q99JW4 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.68□□□□□ -1.82
Lims1Q99JW4 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.68□□□□□ -1.82
Lims1Q99JW4 Gm23099-201ENSMUST00000083454 139 ntBASIC3.68□□□□□ -1.82
Lims1Q99JW4 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.68□□□□□ -1.82
Lims1Q99JW4 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.68□□□□□ -1.82
Lims1Q99JW4 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Lims1Q99JW4 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Lims1Q99JW4 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.67□□□□□ -1.82
Lims1Q99JW4 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Lims1Q99JW4 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Lims1Q99JW4 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.67□□□□□ -1.82
Lims1Q99JW4 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Lims1Q99JW4 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Lims1Q99JW4 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Lims1Q99JW4 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.67□□□□□ -1.82
Lims1Q99JW4 Gm13314-201ENSMUST00000118742 335 ntBASIC3.67□□□□□ -1.82
Lims1Q99JW4 Gm5937-201ENSMUST00000119715 643 ntBASIC3.67□□□□□ -1.82
Lims1Q99JW4 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms