Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm28534-201ENSMUST00000187744 676 ntBASIC3.11□□□□□ -1.91
H1fooQ8VIK3 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.11□□□□□ -1.91
H1fooQ8VIK3 Gm43559-201ENSMUST00000198755 466 ntBASIC3.11□□□□□ -1.91
H1fooQ8VIK3 Gm44524-201ENSMUST00000203899 271 ntBASIC3.11□□□□□ -1.91
H1fooQ8VIK3 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC3.11□□□□□ -1.91
H1fooQ8VIK3 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.11□□□□□ -1.91
H1fooQ8VIK3 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.11□□□□□ -1.91
H1fooQ8VIK3 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.11□□□□□ -1.91
H1fooQ8VIK3 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.11□□□□□ -1.91
H1fooQ8VIK3 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.11□□□□□ -1.91
H1fooQ8VIK3 Gm10298-201ENSMUST00000074801 265 ntBASIC3.11□□□□□ -1.91
H1fooQ8VIK3 Gm22806-201ENSMUST00000082738 136 ntBASIC3.11□□□□□ -1.91
H1fooQ8VIK3 Gm23412-201ENSMUST00000083017 107 ntBASIC3.11□□□□□ -1.91
H1fooQ8VIK3 Gm22353-201ENSMUST00000083918 136 ntBASIC3.11□□□□□ -1.91
H1fooQ8VIK3 Mir496a-201ENSMUST00000093627 79 ntBASIC3.11□□□□□ -1.91
H1fooQ8VIK3 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
H1fooQ8VIK3 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.11□□□□□ -1.91
H1fooQ8VIK3 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
H1fooQ8VIK3 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.11□□□□□ -1.91
H1fooQ8VIK3 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
H1fooQ8VIK3 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
H1fooQ8VIK3 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
H1fooQ8VIK3 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Gm14448-201ENSMUST00000116383 210 ntBASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Gm24635-201ENSMUST00000122712 128 ntBASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Gm23120-201ENSMUST00000157654 287 ntBASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Gm22101-201ENSMUST00000157928 103 ntBASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Gm27535-201ENSMUST00000183814 157 ntBASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Mir3620-201ENSMUST00000184710 61 ntBASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Gm8296-201ENSMUST00000185597 524 ntBASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Gm28724-201ENSMUST00000186149 625 ntBASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Gm23370-202ENSMUST00000197008 129 ntBASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Gm44881-201ENSMUST00000205425 367 ntBASIC3.1□□□□□ -1.91
H1fooQ8VIK3 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.1□□□□□ -1.91
H1fooQ8VIK3 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Gm23723-201ENSMUST00000082996 132 ntBASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Snora31-201ENSMUST00000083213 130 ntBASIC3.1□□□□□ -1.91
H1fooQ8VIK3 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
H1fooQ8VIK3 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm23271-201ENSMUST00000104052 124 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm24172-201ENSMUST00000104127 117 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm22488-201ENSMUST00000116811 127 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm5937-201ENSMUST00000119715 643 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Mir1898-201ENSMUST00000122643 83 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm22613-201ENSMUST00000122679 292 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm26102-201ENSMUST00000157251 284 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm25427-201ENSMUST00000157605 103 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm22890-201ENSMUST00000158642 144 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm10075-201ENSMUST00000162030 545 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm21816-201ENSMUST00000179255 360 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm22263-201ENSMUST00000180060 104 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm10292-201ENSMUST00000183142 581 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm29574-201ENSMUST00000186226 696 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm28159-201ENSMUST00000190296 696 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm5829-201ENSMUST00000191383 351 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm37603-201ENSMUST00000192368 219 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm43355-201ENSMUST00000196541 346 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm44419-201ENSMUST00000203338 229 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm45395-201ENSMUST00000209891 559 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm24950-201ENSMUST00000082768 191 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm23971-201ENSMUST00000083317 191 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm24764-201ENSMUST00000083686 199 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm26165-201ENSMUST00000083791 138 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm23849-201ENSMUST00000083833 191 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Gm26316-201ENSMUST00000083886 191 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
H1fooQ8VIK3 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.92
H1fooQ8VIK3 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.09□□□□□ -1.92
H1fooQ8VIK3 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.09□□□□□ -1.92
H1fooQ8VIK3 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.08□□□□□ -1.92
H1fooQ8VIK3 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
H1fooQ8VIK3 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
H1fooQ8VIK3 Gm23142-201ENSMUST00000101848 105 ntBASIC3.08□□□□□ -1.92
H1fooQ8VIK3 Gm26240-201ENSMUST00000101893 105 ntBASIC3.08□□□□□ -1.92
H1fooQ8VIK3 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
H1fooQ8VIK3 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
H1fooQ8VIK3 Gm23273-201ENSMUST00000104058 135 ntBASIC3.08□□□□□ -1.92
H1fooQ8VIK3 Gm9157-201ENSMUST00000117673 225 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms