Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm26504-201ENSMUST00000102033 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm7164-201ENSMUST00000117503 450 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm14307-201ENSMUST00000118930 291 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm14841-201ENSMUST00000121067 758 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm14297-201ENSMUST00000129110 291 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm24191-201ENSMUST00000157977 122 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm24757-201ENSMUST00000176987 371 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm26502-201ENSMUST00000177732 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Snord116l13-201ENSMUST00000177737 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm25350-201ENSMUST00000177849 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Snord116l15-201ENSMUST00000177940 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm23446-201ENSMUST00000177977 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Snord116l4-201ENSMUST00000177982 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm26201-201ENSMUST00000178047 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm24711-201ENSMUST00000178062 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm24609-201ENSMUST00000178166 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm23265-201ENSMUST00000178321 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm22812-201ENSMUST00000178329 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Snord116l3-201ENSMUST00000178370 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm26246-201ENSMUST00000178388 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm25155-201ENSMUST00000178450 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm24760-201ENSMUST00000178530 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm22285-201ENSMUST00000178576 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm22417-201ENSMUST00000178656 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Snord116l2-201ENSMUST00000178675 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm26270-201ENSMUST00000178690 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Snord116l16-201ENSMUST00000178777 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm23313-201ENSMUST00000178931 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Snord116l17-201ENSMUST00000178936 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm23089-201ENSMUST00000178947 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm24862-201ENSMUST00000179103 79 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm23310-201ENSMUST00000179105 79 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm24153-201ENSMUST00000179280 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm25461-201ENSMUST00000179293 79 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm25597-201ENSMUST00000179388 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm25816-201ENSMUST00000179764 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm26180-201ENSMUST00000179942 107 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm26188-201ENSMUST00000179963 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm26433-201ENSMUST00000180227 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm22128-201ENSMUST00000180346 94 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm42621-201ENSMUST00000198114 275 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm44520-201ENSMUST00000205447 802 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm2436-201ENSMUST00000219562 774 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm24948-201ENSMUST00000082866 207 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Mir10a-201ENSMUST00000083585 110 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CopaQ8CIE6 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CopaQ8CIE6 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CopaQ8CIE6 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.39□□□□□ -1.87
CopaQ8CIE6 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.39□□□□□ -1.87
CopaQ8CIE6 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CopaQ8CIE6 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.39□□□□□ -1.87
CopaQ8CIE6 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.39□□□□□ -1.87
CopaQ8CIE6 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.39□□□□□ -1.87
CopaQ8CIE6 Gm11414-201ENSMUST00000121795 263 ntBASIC3.39□□□□□ -1.87
CopaQ8CIE6 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.39□□□□□ -1.87
CopaQ8CIE6 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.39□□□□□ -1.87
CopaQ8CIE6 Gm24857-201ENSMUST00000158061 310 ntBASIC3.39□□□□□ -1.87
CopaQ8CIE6 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.39□□□□□ -1.87
CopaQ8CIE6 Gm29352-201ENSMUST00000188054 544 ntBASIC3.39□□□□□ -1.87
CopaQ8CIE6 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC3.39□□□□□ -1.87
CopaQ8CIE6 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CopaQ8CIE6 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.39□□□□□ -1.87
CopaQ8CIE6 AC102369.1-201ENSMUST00000218415 373 ntBASIC3.39□□□□□ -1.87
CopaQ8CIE6 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CopaQ8CIE6 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
CopaQ8CIE6 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC3.39□□□□□ -1.87
CopaQ8CIE6 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
CopaQ8CIE6 Gm25475-201ENSMUST00000082825 180 ntBASIC3.39□□□□□ -1.87
CopaQ8CIE6 Gm26111-201ENSMUST00000083969 106 ntBASIC3.39□□□□□ -1.87
CopaQ8CIE6 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CopaQ8CIE6 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.39□□□□□ -1.87
CopaQ8CIE6 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CopaQ8CIE6 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CopaQ8CIE6 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.38□□□□□ -1.87
CopaQ8CIE6 Gm23175-201ENSMUST00000104371 132 ntBASIC3.38□□□□□ -1.87
CopaQ8CIE6 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.38□□□□□ -1.87
CopaQ8CIE6 Gm14013-201ENSMUST00000119006 270 ntBASIC3.38□□□□□ -1.87
CopaQ8CIE6 Gm11254-201ENSMUST00000122368 653 ntBASIC3.38□□□□□ -1.87
CopaQ8CIE6 Gm26255-201ENSMUST00000122492 103 ntBASIC3.38□□□□□ -1.87
CopaQ8CIE6 Gm23000-201ENSMUST00000157083 139 ntBASIC3.38□□□□□ -1.87
CopaQ8CIE6 Gm22791-201ENSMUST00000157232 145 ntBASIC3.38□□□□□ -1.87
CopaQ8CIE6 Gm24499-201ENSMUST00000158446 104 ntBASIC3.38□□□□□ -1.87
CopaQ8CIE6 Gm22434-201ENSMUST00000158549 122 ntBASIC3.38□□□□□ -1.87
CopaQ8CIE6 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.38□□□□□ -1.87
CopaQ8CIE6 Gm16289-201ENSMUST00000162079 183 ntBASIC3.38□□□□□ -1.87
CopaQ8CIE6 Gm22910-201ENSMUST00000178568 132 ntBASIC3.38□□□□□ -1.87
CopaQ8CIE6 Gm28700-201ENSMUST00000187614 579 ntBASIC3.38□□□□□ -1.87
CopaQ8CIE6 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 154.6 ms