Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm11356-201ENSMUST00000118974 192 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm9225-201ENSMUST00000121921 836 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm16533-201ENSMUST00000140035 228 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm24780-201ENSMUST00000157635 143 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm24901-201ENSMUST00000158125 110 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm25163-201ENSMUST00000158905 104 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm24082-201ENSMUST00000175175 83 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm25175-201ENSMUST00000178712 79 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Mir7050-201ENSMUST00000184636 60 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Mir6363-201ENSMUST00000184880 114 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm8392-201ENSMUST00000185647 835 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm28151-201ENSMUST00000189404 951 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm37550-201ENSMUST00000193230 463 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm7692-201ENSMUST00000213534 409 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 AL772265.1-201ENSMUST00000214379 305 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm19326-201ENSMUST00000219818 326 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm4945-201ENSMUST00000075152 453 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm25257-201ENSMUST00000083907 110 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Mir466k-201ENSMUST00000116774 122 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Gm12191-201ENSMUST00000118307 348 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Gm9703-201ENSMUST00000119573 343 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Gm12770-201ENSMUST00000121734 462 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Gm15077-201ENSMUST00000122344 362 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Mir7013-201ENSMUST00000183540 72 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Gm18964-201ENSMUST00000193013 563 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Gm37353-201ENSMUST00000194497 313 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Gm44903-201ENSMUST00000206840 130 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Gm44718-201ENSMUST00000206886 359 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.12□□□□□ -1.91
Nup88Q8CEC0 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 AC110380.1-201ENSMUST00000226987 389 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Gm10343-201ENSMUST00000096279 348 ntBASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Nup88Q8CEC0 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.11□□□□□ -1.91
Nup88Q8CEC0 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Nup88Q8CEC0 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Nup88Q8CEC0 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Nup88Q8CEC0 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Nup88Q8CEC0 Gm15807-201ENSMUST00000119880 1128 ntBASIC3.11□□□□□ -1.91
Nup88Q8CEC0 Gm24291-201ENSMUST00000157633 162 ntBASIC3.11□□□□□ -1.91
Nup88Q8CEC0 Gm22555-201ENSMUST00000157801 62 ntBASIC3.11□□□□□ -1.91
Nup88Q8CEC0 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC3.11□□□□□ -1.91
Nup88Q8CEC0 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Nup88Q8CEC0 Gm26652-202ENSMUST00000181672 475 ntBASIC3.11□□□□□ -1.91
Nup88Q8CEC0 Gm27957-201ENSMUST00000184054 127 ntBASIC3.11□□□□□ -1.91
Nup88Q8CEC0 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.11□□□□□ -1.91
Nup88Q8CEC0 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.11□□□□□ -1.91
Nup88Q8CEC0 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC3.11□□□□□ -1.91
Nup88Q8CEC0 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.11□□□□□ -1.91
Nup88Q8CEC0 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.11□□□□□ -1.91
Nup88Q8CEC0 Gm19441-201ENSMUST00000221545 330 ntBASIC3.11□□□□□ -1.91
Nup88Q8CEC0 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.11□□□□□ -1.91
Nup88Q8CEC0 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Nup88Q8CEC0 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Nup88Q8CEC0 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Nup88Q8CEC0 Gm24948-201ENSMUST00000082866 207 ntBASIC3.11□□□□□ -1.91
Nup88Q8CEC0 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Nup88Q8CEC0 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3.1□□□□□ -1.91
Nup88Q8CEC0 Gm15084-201ENSMUST00000178585 1502 ntBASIC3.1□□□□□ -1.91
Nup88Q8CEC0 Gm15106-201ENSMUST00000119691 821 ntBASIC3.1□□□□□ -1.91
Nup88Q8CEC0 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.1□□□□□ -1.91
Nup88Q8CEC0 Gm22416-201ENSMUST00000158590 88 ntBASIC3.1□□□□□ -1.91
Nup88Q8CEC0 Gm25119-201ENSMUST00000158815 88 ntBASIC3.1□□□□□ -1.91
Nup88Q8CEC0 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
Nup88Q8CEC0 Gm20660-201ENSMUST00000177515 289 ntBASIC3.1□□□□□ -1.91
Nup88Q8CEC0 Gm27698-201ENSMUST00000184060 249 ntBASIC3.1□□□□□ -1.91
Nup88Q8CEC0 Gm27786-201ENSMUST00000184337 70 ntBASIC3.1□□□□□ -1.91
Nup88Q8CEC0 Gm27608-201ENSMUST00000184822 162 ntBASIC3.1□□□□□ -1.91
Nup88Q8CEC0 Gm30341-201ENSMUST00000194363 289 ntBASIC3.1□□□□□ -1.91
Nup88Q8CEC0 Gm44060-201ENSMUST00000204440 410 ntBASIC3.1□□□□□ -1.91
Nup88Q8CEC0 Gm45452-201ENSMUST00000210905 177 ntBASIC3.1□□□□□ -1.91
Nup88Q8CEC0 CT010480.5-201ENSMUST00000225026 217 ntBASIC3.1□□□□□ -1.91
Nup88Q8CEC0 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Nup88Q8CEC0 Gm11845-201ENSMUST00000117886 327 ntBASIC3.09□□□□□ -1.91
Nup88Q8CEC0 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC3.09□□□□□ -1.91
Nup88Q8CEC0 Gm5937-201ENSMUST00000119715 643 ntBASIC3.09□□□□□ -1.91
Nup88Q8CEC0 Gm14159-201ENSMUST00000119832 451 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms