Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Gm38041-201ENSMUST00000194445 661 ntBASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Gm19140-201ENSMUST00000209790 421 ntBASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 AC117202.3-201ENSMUST00000228532 310 ntBASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Gm23515-201ENSMUST00000082829 107 ntBASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Gm20172-201ENSMUST00000193138 1551 ntBASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Gm25341-201ENSMUST00000157461 268 ntBASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Gm24546-201ENSMUST00000158652 102 ntBASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Gm25314-201ENSMUST00000178810 79 ntBASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Mir6916-201ENSMUST00000184514 63 ntBASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Gm29134-201ENSMUST00000186579 126 ntBASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Gm28843-201ENSMUST00000189198 678 ntBASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Gm29546-201ENSMUST00000191171 678 ntBASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Gm36866-201ENSMUST00000193343 657 ntBASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Gm36047-201ENSMUST00000193659 657 ntBASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Gm20857-201ENSMUST00000194766 657 ntBASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Gm20858-201ENSMUST00000195459 657 ntBASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Igkv12-49-201ENSMUST00000197714 278 ntBASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Gm44519-201ENSMUST00000206486 122 ntBASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Mir181a-1-201ENSMUST00000083631 87 ntBASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Atg4aQ8C9S8 Gm9850-201ENSMUST00000117916 227 ntBASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Gm14562-201ENSMUST00000129885 543 ntBASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Gm23234-201ENSMUST00000157304 134 ntBASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Gm27379-201ENSMUST00000183730 123 ntBASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Mir6993-201ENSMUST00000184912 65 ntBASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Gm28399-201ENSMUST00000186221 318 ntBASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Gm28572-201ENSMUST00000187444 318 ntBASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Gm28661-201ENSMUST00000188231 681 ntBASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Gm29192-201ENSMUST00000190942 377 ntBASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Gm45402-201ENSMUST00000211796 223 ntBASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 mt-Tr-201ENSMUST00000082412 68 ntBASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Gm26263-201ENSMUST00000083281 164 ntBASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 Gm3867-201ENSMUST00000086108 279 ntBASIC3.09□□□□□ -1.91
Atg4aQ8C9S8 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm22656-201ENSMUST00000104199 171 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm11386-201ENSMUST00000117761 347 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm14638-201ENSMUST00000121338 216 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm25970-201ENSMUST00000157165 86 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm25624-201ENSMUST00000157222 275 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm25283-201ENSMUST00000157272 77 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm26041-201ENSMUST00000158148 108 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm16232-201ENSMUST00000162856 167 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm27527-201ENSMUST00000183903 99 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm27385-201ENSMUST00000184747 104 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm27608-201ENSMUST00000184822 162 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm34015-201ENSMUST00000194908 451 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm19147-201ENSMUST00000199622 652 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm44472-201ENSMUST00000204922 943 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 AC166358.10-201ENSMUST00000220556 144 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm24037-201ENSMUST00000082871 180 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm22974-201ENSMUST00000083301 103 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm381-201ENSMUST00000117443 2037 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Gm15084-201ENSMUST00000178585 1502 ntBASIC3.08□□□□□ -1.92
Atg4aQ8C9S8 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.07□□□□□ -1.92
Atg4aQ8C9S8 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.07□□□□□ -1.92
Atg4aQ8C9S8 Gm22831-201ENSMUST00000102473 109 ntBASIC3.07□□□□□ -1.92
Atg4aQ8C9S8 Gm11577-201ENSMUST00000118030 737 ntBASIC3.07□□□□□ -1.92
Atg4aQ8C9S8 Gm5287-201ENSMUST00000120666 598 ntBASIC3.07□□□□□ -1.92
Atg4aQ8C9S8 AA413626-201ENSMUST00000121125 494 ntBASIC3.07□□□□□ -1.92
Atg4aQ8C9S8 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC3.07□□□□□ -1.92
Atg4aQ8C9S8 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms