Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Gm19418-201ENSMUST00000197436 580 ntBASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Gm44348-201ENSMUST00000200165 122 ntBASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Gm44922-201ENSMUST00000206690 90 ntBASIC4.63□□□□□ -1.67
Usp40Q8BWR4 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Gm24867-201ENSMUST00000104161 107 ntBASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Gm13761-201ENSMUST00000117238 807 ntBASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Gm14469-201ENSMUST00000118363 202 ntBASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Gm13153-201ENSMUST00000120969 637 ntBASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Gm25321-201ENSMUST00000122558 102 ntBASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Gm23391-201ENSMUST00000157579 104 ntBASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Gm23725-201ENSMUST00000177876 107 ntBASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Gm25235-201ENSMUST00000179933 107 ntBASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Gm27445-201ENSMUST00000184484 72 ntBASIC4.62□□□□□ -1.67
Usp40Q8BWR4 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Mir3535-201ENSMUST00000197651 147 ntBASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC4.62□□□□□ -1.67
Usp40Q8BWR4 AC158622.1-201ENSMUST00000217107 230 ntBASIC4.62□□□□□ -1.67
Usp40Q8BWR4 AC173115.1-201ENSMUST00000220835 211 ntBASIC4.62□□□□□ -1.67
Usp40Q8BWR4 AC154636.2-201ENSMUST00000222538 161 ntBASIC4.62□□□□□ -1.67
Usp40Q8BWR4 AC091783.4-201ENSMUST00000224940 611 ntBASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Usp40Q8BWR4 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm25538-201ENSMUST00000101943 107 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm24119-201ENSMUST00000103979 246 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 n-R5s67-201ENSMUST00000104336 114 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm23841-201ENSMUST00000116951 114 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm11576-201ENSMUST00000117433 417 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm15112-201ENSMUST00000120152 860 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm15190-201ENSMUST00000120855 276 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm14768-201ENSMUST00000122126 678 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm25666-201ENSMUST00000157702 107 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm25520-201ENSMUST00000158389 118 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm22891-201ENSMUST00000158641 164 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm17065-201ENSMUST00000165245 239 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm8114-201ENSMUST00000172225 484 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm28118-201ENSMUST00000185957 294 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Igkv4-65-201ENSMUST00000196986 358 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 AC153564.2-201ENSMUST00000219464 273 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm9370-201ENSMUST00000222787 609 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 AC129541.1-201ENSMUST00000226940 523 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm26497-201ENSMUST00000083146 107 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm23645-201ENSMUST00000083228 108 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Usp40Q8BWR4 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.61□□□□□ -1.67
Usp40Q8BWR4 Gm37642-201ENSMUST00000193166 1735 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Gm25168-201ENSMUST00000104189 132 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Gm14142-201ENSMUST00000117833 296 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Gm11935-201ENSMUST00000118608 399 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Gm12647-201ENSMUST00000118977 265 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Gm15807-201ENSMUST00000119880 1128 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Gm13967-201ENSMUST00000120404 380 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Gm13396-201ENSMUST00000120617 271 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Gm16232-201ENSMUST00000162856 167 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Gm25956-201ENSMUST00000175115 217 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Gm25071-201ENSMUST00000175232 70 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Gm24713-201ENSMUST00000178850 107 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Gm25448-201ENSMUST00000180065 107 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Mir6993-201ENSMUST00000184912 65 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Gm37801-201ENSMUST00000194754 274 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Gm7407-201ENSMUST00000208301 568 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Gm44594-201ENSMUST00000208982 407 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 CT954323.1-201ENSMUST00000222774 229 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 AC107757.3-201ENSMUST00000226312 535 ntBASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Usp40Q8BWR4 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms