Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm36984-201ENSMUST00000192770 235 ntBASIC2.54□□□□□ -2
Ccdc40Q8BI79 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.54□□□□□ -2
Ccdc40Q8BI79 Trbv24-201ENSMUST00000194614 347 ntBASIC2.54□□□□□ -2
Ccdc40Q8BI79 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2.54□□□□□ -2
Ccdc40Q8BI79 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.54□□□□□ -2
Ccdc40Q8BI79 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.54□□□□□ -2
Ccdc40Q8BI79 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC2.54□□□□□ -2
Ccdc40Q8BI79 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.54□□□□□ -2
Ccdc40Q8BI79 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ccdc40Q8BI79 Gm22622-201ENSMUST00000082870 129 ntBASIC2.54□□□□□ -2
Ccdc40Q8BI79 Gm22443-201ENSMUST00000082890 107 ntBASIC2.54□□□□□ -2
Ccdc40Q8BI79 Gm22154-201ENSMUST00000083844 131 ntBASIC2.54□□□□□ -2
Ccdc40Q8BI79 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ccdc40Q8BI79 Gm23747-201ENSMUST00000104228 131 ntBASIC2.53□□□□□ -2
Ccdc40Q8BI79 Gm25624-201ENSMUST00000157222 275 ntBASIC2.53□□□□□ -2
Ccdc40Q8BI79 Gm26271-201ENSMUST00000158349 104 ntBASIC2.53□□□□□ -2
Ccdc40Q8BI79 Gm24056-201ENSMUST00000158617 146 ntBASIC2.53□□□□□ -2
Ccdc40Q8BI79 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.53□□□□□ -2
Ccdc40Q8BI79 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC2.53□□□□□ -2
Ccdc40Q8BI79 Gm22290-201ENSMUST00000177655 107 ntBASIC2.53□□□□□ -2
Ccdc40Q8BI79 Gm23568-201ENSMUST00000177960 92 ntBASIC2.53□□□□□ -2
Ccdc40Q8BI79 Gm22583-201ENSMUST00000178031 107 ntBASIC2.53□□□□□ -2
Ccdc40Q8BI79 Gm24829-201ENSMUST00000179245 92 ntBASIC2.53□□□□□ -2
Ccdc40Q8BI79 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.53□□□□□ -2
Ccdc40Q8BI79 Gm37000-201ENSMUST00000193058 428 ntBASIC2.53□□□□□ -2
Ccdc40Q8BI79 Gm38238-201ENSMUST00000194334 346 ntBASIC2.53□□□□□ -2
Ccdc40Q8BI79 Gm43114-201ENSMUST00000198298 343 ntBASIC2.53□□□□□ -2
Ccdc40Q8BI79 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.53□□□□□ -2
Ccdc40Q8BI79 Gm44472-201ENSMUST00000204922 943 ntBASIC2.53□□□□□ -2
Ccdc40Q8BI79 Gm44519-201ENSMUST00000206486 122 ntBASIC2.53□□□□□ -2
Ccdc40Q8BI79 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.53□□□□□ -2
Ccdc40Q8BI79 Gm45240-201ENSMUST00000211437 674 ntBASIC2.53□□□□□ -2
Ccdc40Q8BI79 AC111046.1-201ENSMUST00000217715 412 ntBASIC2.53□□□□□ -2
Ccdc40Q8BI79 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.53□□□□□ -2
Ccdc40Q8BI79 AC140477.1-201ENSMUST00000222354 246 ntBASIC2.53□□□□□ -2
Ccdc40Q8BI79 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.53□□□□□ -2
Ccdc40Q8BI79 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Ccdc40Q8BI79 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Ccdc40Q8BI79 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Gm24670-201ENSMUST00000104154 132 ntBASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Gm14770-201ENSMUST00000122197 312 ntBASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Gm13602-201ENSMUST00000122405 493 ntBASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Gm24212-201ENSMUST00000158258 132 ntBASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Mir6335-201ENSMUST00000184081 98 ntBASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Gm29216-201ENSMUST00000187117 492 ntBASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Mir3069-201ENSMUST00000198802 65 ntBASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Gm44050-201ENSMUST00000204263 527 ntBASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Gm44818-201ENSMUST00000206608 358 ntBASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Gm22810-201ENSMUST00000082741 158 ntBASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Ccdc40Q8BI79 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ccdc40Q8BI79 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC2.51□□□□□ -2.01
Ccdc40Q8BI79 Gm13356-201ENSMUST00000121678 335 ntBASIC2.51□□□□□ -2.01
Ccdc40Q8BI79 Gm24839-201ENSMUST00000122602 107 ntBASIC2.51□□□□□ -2.01
Ccdc40Q8BI79 Gm25961-201ENSMUST00000157174 135 ntBASIC2.51□□□□□ -2.01
Ccdc40Q8BI79 Gm24771-201ENSMUST00000158508 137 ntBASIC2.51□□□□□ -2.01
Ccdc40Q8BI79 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC2.51□□□□□ -2.01
Ccdc40Q8BI79 Gm18416-201ENSMUST00000175635 1003 ntBASIC2.51□□□□□ -2.01
Ccdc40Q8BI79 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.51□□□□□ -2.01
Ccdc40Q8BI79 Gm28282-201ENSMUST00000186072 186 ntBASIC2.51□□□□□ -2.01
Ccdc40Q8BI79 Gm37557-201ENSMUST00000191640 139 ntBASIC2.51□□□□□ -2.01
Ccdc40Q8BI79 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC2.51□□□□□ -2.01
Ccdc40Q8BI79 Olfr575-201ENSMUST00000084812 957 ntBASIC2.51□□□□□ -2.01
Ccdc40Q8BI79 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ccdc40Q8BI79 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Ccdc40Q8BI79 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.51□□□□□ -2.01
Ccdc40Q8BI79 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.5□□□□□ -2.01
Ccdc40Q8BI79 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.5□□□□□ -2.01
Ccdc40Q8BI79 Gm26247-201ENSMUST00000116702 91 ntBASIC2.5□□□□□ -2.01
Ccdc40Q8BI79 Gm12102-201ENSMUST00000118251 604 ntBASIC2.5□□□□□ -2.01
Ccdc40Q8BI79 Gm6660-201ENSMUST00000179149 468 ntBASIC2.5□□□□□ -2.01
Ccdc40Q8BI79 Gm3852-201ENSMUST00000182781 264 ntBASIC2.5□□□□□ -2.01
Ccdc40Q8BI79 Gm27532-201ENSMUST00000183726 113 ntBASIC2.5□□□□□ -2.01
Ccdc40Q8BI79 Gm29335-201ENSMUST00000188361 459 ntBASIC2.5□□□□□ -2.01
Ccdc40Q8BI79 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.5□□□□□ -2.01
Ccdc40Q8BI79 Gm43978-201ENSMUST00000203491 451 ntBASIC2.5□□□□□ -2.01
Ccdc40Q8BI79 Gm44966-201ENSMUST00000208096 157 ntBASIC2.5□□□□□ -2.01
Ccdc40Q8BI79 Gm8031-201ENSMUST00000213430 626 ntBASIC2.5□□□□□ -2.01
Ccdc40Q8BI79 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Ccdc40Q8BI79 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Ccdc40Q8BI79 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.5□□□□□ -2.01
Ccdc40Q8BI79 Gm26166-201ENSMUST00000083788 107 ntBASIC2.5□□□□□ -2.01
Ccdc40Q8BI79 Gm23042-201ENSMUST00000083866 101 ntBASIC2.5□□□□□ -2.01
Ccdc40Q8BI79 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms