Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm6762-201ENSMUST00000121769 289 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24596-201ENSMUST00000122504 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm23791-201ENSMUST00000122553 293 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm23137-201ENSMUST00000157559 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24584-201ENSMUST00000157972 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25211-201ENSMUST00000177553 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24540-201ENSMUST00000177627 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25256-201ENSMUST00000177746 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22822-201ENSMUST00000177941 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Rnu6-201ENSMUST00000178023 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm23151-201ENSMUST00000178061 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm23402-201ENSMUST00000178130 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25245-201ENSMUST00000178139 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24753-201ENSMUST00000178183 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25829-201ENSMUST00000178275 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22092-201ENSMUST00000178290 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24486-201ENSMUST00000178420 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm23217-201ENSMUST00000178482 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm26245-201ENSMUST00000178491 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24019-201ENSMUST00000178620 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm23610-201ENSMUST00000178659 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm23092-201ENSMUST00000178688 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25709-201ENSMUST00000178844 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25547-201ENSMUST00000178877 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25312-201ENSMUST00000178972 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24722-201ENSMUST00000179017 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22969-201ENSMUST00000179018 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25101-201ENSMUST00000179057 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm26378-201ENSMUST00000179093 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24873-201ENSMUST00000179101 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm23934-201ENSMUST00000179111 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22623-201ENSMUST00000179244 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm26243-201ENSMUST00000179260 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25737-201ENSMUST00000179274 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22618-201ENSMUST00000179376 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24182-201ENSMUST00000179419 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24242-201ENSMUST00000179440 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24863-201ENSMUST00000179499 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25064-201ENSMUST00000179535 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm26295-201ENSMUST00000179690 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm23712-201ENSMUST00000179713 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22823-201ENSMUST00000179754 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22360-201ENSMUST00000179775 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24978-201ENSMUST00000179782 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24967-201ENSMUST00000179791 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25173-201ENSMUST00000179794 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24870-201ENSMUST00000179897 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22288-201ENSMUST00000179904 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22645-201ENSMUST00000180010 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24565-201ENSMUST00000180099 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm23805-201ENSMUST00000180129 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm23512-201ENSMUST00000180237 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25327-201ENSMUST00000180263 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm26058-201ENSMUST00000180294 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22418-201ENSMUST00000180326 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm27374-201ENSMUST00000183660 81 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Mir6371-201ENSMUST00000184470 111 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm37128-201ENSMUST00000192599 232 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Trav15n-3-201ENSMUST00000200498 168 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm23629-201ENSMUST00000082465 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm23924-201ENSMUST00000082474 108 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22246-201ENSMUST00000082478 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22749-201ENSMUST00000082490 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22747-201ENSMUST00000082495 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm23296-201ENSMUST00000082555 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22063-201ENSMUST00000082560 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Snord42a-201ENSMUST00000082606 65 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm26129-201ENSMUST00000082719 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24859-201ENSMUST00000082729 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25929-201ENSMUST00000082784 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm23057-201ENSMUST00000082801 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm26328-201ENSMUST00000082821 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm26331-201ENSMUST00000082824 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24205-201ENSMUST00000082953 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25405-201ENSMUST00000082973 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22628-201ENSMUST00000082988 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm26324-201ENSMUST00000083073 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24535-201ENSMUST00000083140 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm26496-201ENSMUST00000083150 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm26127-201ENSMUST00000083193 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24456-201ENSMUST00000083198 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24458-201ENSMUST00000083204 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24018-201ENSMUST00000083232 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25794-201ENSMUST00000083286 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25790-201ENSMUST00000083293 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm22295-201ENSMUST00000083311 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm23454-201ENSMUST00000083332 133 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25127-201ENSMUST00000083336 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25583-201ENSMUST00000083413 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm25577-201ENSMUST00000083414 107 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm24414-201ENSMUST00000083434 107 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 127.5 ms