Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm25581-201ENSMUST00000083410 164 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm25937-201ENSMUST00000083912 107 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm25207-201ENSMUST00000093745 107 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Gm26140-201ENSMUST00000103807 110 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Gm24068-201ENSMUST00000104513 132 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Gm11456-201ENSMUST00000121070 256 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Gm23000-201ENSMUST00000157083 139 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Gm26149-201ENSMUST00000157432 108 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Gm23380-201ENSMUST00000158448 103 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Gm23702-201ENSMUST00000158840 130 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Gm16232-201ENSMUST00000162856 167 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Gm24019-201ENSMUST00000178620 107 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Gm26243-201ENSMUST00000179260 107 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Ighv2-8-201ENSMUST00000193935 262 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Gm44063-201ENSMUST00000203307 376 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Gm44858-201ENSMUST00000207360 154 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Gm35405-201ENSMUST00000218754 400 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Gm23296-201ENSMUST00000082555 107 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Gm24859-201ENSMUST00000082729 107 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Snora31-201ENSMUST00000083213 130 ntBASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ddx55Q6ZPL9 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Gm22611-201ENSMUST00000158288 150 ntBASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Gm22435-201ENSMUST00000158552 128 ntBASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Gm24819-201ENSMUST00000175094 166 ntBASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Snord92-201ENSMUST00000175548 85 ntBASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Gm24264-201ENSMUST00000179835 94 ntBASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Gm18551-201ENSMUST00000195594 642 ntBASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Gm19726-201ENSMUST00000205008 240 ntBASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Gm26164-201ENSMUST00000083793 104 ntBASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ddx55Q6ZPL9 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Gm23063-201ENSMUST00000102350 93 ntBASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Gm6956-201ENSMUST00000134724 546 ntBASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Gm8121-201ENSMUST00000153583 499 ntBASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Gm22036-201ENSMUST00000157279 215 ntBASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Gm25373-201ENSMUST00000158156 115 ntBASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Gm20698-201ENSMUST00000175657 233 ntBASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Gm43651-201ENSMUST00000199796 439 ntBASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Gm44446-201ENSMUST00000204864 255 ntBASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Gm45380-201ENSMUST00000210465 315 ntBASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Gm22249-201ENSMUST00000082485 136 ntBASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Gm24950-201ENSMUST00000082768 191 ntBASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Gm23971-201ENSMUST00000083317 191 ntBASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Gm23849-201ENSMUST00000083833 191 ntBASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Gm26316-201ENSMUST00000083886 191 ntBASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Ddx55Q6ZPL9 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm14919-201ENSMUST00000120839 390 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm24385-201ENSMUST00000122694 350 ntBASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.79□□□□□ -1.8
Ddx55Q6ZPL9 Gm23671-201ENSMUST00000157472 103 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms