Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm22538-201ENSMUST00000158169 299 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 Gm17072-201ENSMUST00000166673 658 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 Gm21754-201ENSMUST00000177550 479 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 Gm27796-201ENSMUST00000183863 261 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 Gm27845-201ENSMUST00000184479 114 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 Gm37455-201ENSMUST00000191993 529 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 Gm44465-201ENSMUST00000199536 114 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 Gm5001-201ENSMUST00000204361 331 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 Gm44157-201ENSMUST00000204720 410 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 Gm7039-201ENSMUST00000205138 346 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 AC160031.2-201ENSMUST00000218242 274 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 AC124346.1-201ENSMUST00000218539 364 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 Gm7422-201ENSMUST00000220115 640 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 Gm23515-201ENSMUST00000082829 107 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 Gm24817-201ENSMUST00000093672 105 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 Gm23422-201ENSMUST00000102000 107 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Mir687-201ENSMUST00000102166 89 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Gm11512-201ENSMUST00000119669 663 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Gm14877-201ENSMUST00000119803 478 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Gm14593-201ENSMUST00000119948 294 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Gm25318-201ENSMUST00000122554 314 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Gm22026-201ENSMUST00000122735 281 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Gm15899-201ENSMUST00000128586 238 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Gm22668-201ENSMUST00000158716 260 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Gm15914-201ENSMUST00000161922 309 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Gm18520-201ENSMUST00000174783 658 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Gm23402-201ENSMUST00000178130 107 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Gm23523-201ENSMUST00000180190 107 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Mir6916-201ENSMUST00000184514 63 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Gm19202-201ENSMUST00000198096 808 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Gm44223-201ENSMUST00000204854 114 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.34□□□□□ -1.87
Smarca1Q6PGB8 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Smarca1Q6PGB8 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.34□□□□□ -1.88
Smarca1Q6PGB8 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Smarca1Q6PGB8 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.33□□□□□ -1.88
Smarca1Q6PGB8 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.33□□□□□ -1.88
Smarca1Q6PGB8 Gm15282-201ENSMUST00000117707 300 ntBASIC3.33□□□□□ -1.88
Smarca1Q6PGB8 Gm7071-201ENSMUST00000120458 462 ntBASIC3.33□□□□□ -1.88
Smarca1Q6PGB8 Gm23213-201ENSMUST00000122715 313 ntBASIC3.33□□□□□ -1.88
Smarca1Q6PGB8 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.33□□□□□ -1.88
Smarca1Q6PGB8 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Smarca1Q6PGB8 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Smarca1Q6PGB8 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Smarca1Q6PGB8 Gm43393-201ENSMUST00000200147 194 ntBASIC3.33□□□□□ -1.88
Smarca1Q6PGB8 Gm6842-201ENSMUST00000211361 390 ntBASIC3.33□□□□□ -1.88
Smarca1Q6PGB8 AC167229.1-201ENSMUST00000220057 469 ntBASIC3.33□□□□□ -1.88
Smarca1Q6PGB8 Gm23723-201ENSMUST00000082996 132 ntBASIC3.33□□□□□ -1.88
Smarca1Q6PGB8 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 Gm12723-201ENSMUST00000120700 451 ntBASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 Gm14069-201ENSMUST00000120815 229 ntBASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 Gm16569-201ENSMUST00000160526 314 ntBASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 Gm20651-201ENSMUST00000177219 329 ntBASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 Gm21893-201ENSMUST00000179119 397 ntBASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 Gm27698-201ENSMUST00000184060 249 ntBASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 Gm28779-201ENSMUST00000189678 323 ntBASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 Gm28506-201ENSMUST00000189937 150 ntBASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 Gm45312-201ENSMUST00000210566 311 ntBASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Smarca1Q6PGB8 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Smarca1Q6PGB8 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Smarca1Q6PGB8 Gm14013-201ENSMUST00000119006 270 ntBASIC3.31□□□□□ -1.88
Smarca1Q6PGB8 Gm12793-201ENSMUST00000119268 292 ntBASIC3.31□□□□□ -1.88
Smarca1Q6PGB8 Gm11471-201ENSMUST00000121824 198 ntBASIC3.31□□□□□ -1.88
Smarca1Q6PGB8 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC3.31□□□□□ -1.88
Smarca1Q6PGB8 Gm22322-201ENSMUST00000157151 111 ntBASIC3.31□□□□□ -1.88
Smarca1Q6PGB8 Gm23956-201ENSMUST00000157211 119 ntBASIC3.31□□□□□ -1.88
Smarca1Q6PGB8 Gm26215-201ENSMUST00000158584 139 ntBASIC3.31□□□□□ -1.88
Smarca1Q6PGB8 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.31□□□□□ -1.88
Smarca1Q6PGB8 Gm26622-201ENSMUST00000180520 298 ntBASIC3.31□□□□□ -1.88
Smarca1Q6PGB8 Gm44476-201ENSMUST00000196225 91 ntBASIC3.31□□□□□ -1.88
Smarca1Q6PGB8 Gm44718-201ENSMUST00000206886 359 ntBASIC3.31□□□□□ -1.88
Smarca1Q6PGB8 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Smarca1Q6PGB8 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Smarca1Q6PGB8 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Smarca1Q6PGB8 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.3□□□□□ -1.88
Smarca1Q6PGB8 Gm23752-201ENSMUST00000157584 115 ntBASIC3.3□□□□□ -1.88
Smarca1Q6PGB8 Gm26214-201ENSMUST00000158581 107 ntBASIC3.3□□□□□ -1.88
Smarca1Q6PGB8 Gm20689-201ENSMUST00000176033 279 ntBASIC3.3□□□□□ -1.88
Smarca1Q6PGB8 Gm23725-201ENSMUST00000177876 107 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms